Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
TMEM53Q6P2H8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM53Q6P2H8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM53Q6P2H8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM53Q6P2H8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TMEM53Q6P2H8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.59■■□□□ 1.05
TMEM53Q6P2H8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TMEM53Q6P2H8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.59■■□□□ 1.05
TMEM53Q6P2H8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TMEM53Q6P2H8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TMEM53Q6P2H8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
TMEM53Q6P2H8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TMEM53Q6P2H8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TMEM53Q6P2H8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TMEM53Q6P2H8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TMEM53Q6P2H8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TMEM53Q6P2H8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
TMEM53Q6P2H8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.58■■□□□ 1.04
TMEM53Q6P2H8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TMEM53Q6P2H8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TMEM53Q6P2H8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TMEM53Q6P2H8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
TMEM53Q6P2H8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.57■■□□□ 1.04
TMEM53Q6P2H8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM53Q6P2H8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM53Q6P2H8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM53Q6P2H8 AC022413.1-201ENST00000624602 984 ntBASIC21.56■■□□□ 1.04
TMEM53Q6P2H8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEM53Q6P2H8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.56■■□□□ 1.04
TMEM53Q6P2H8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM53Q6P2H8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TMEM53Q6P2H8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM53Q6P2H8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEM53Q6P2H8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM53Q6P2H8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.54■■□□□ 1.04
TMEM53Q6P2H8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM53Q6P2H8 AC060814.1-201ENST00000554326 538 ntBASIC21.54■■□□□ 1.04
TMEM53Q6P2H8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM53Q6P2H8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM53Q6P2H8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM53Q6P2H8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM53Q6P2H8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM53Q6P2H8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.53■■□□□ 1.04
TMEM53Q6P2H8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM53Q6P2H8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM53Q6P2H8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TMEM53Q6P2H8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
TMEM53Q6P2H8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM53Q6P2H8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.52■■□□□ 1.04
TMEM53Q6P2H8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TMEM53Q6P2H8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TMEM53Q6P2H8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TMEM53Q6P2H8 AP004609.3-201ENST00000610705 1884 ntBASIC21.52■■□□□ 1.03
TMEM53Q6P2H8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM53Q6P2H8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.51■■□□□ 1.03
TMEM53Q6P2H8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM53Q6P2H8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.51■■□□□ 1.03
TMEM53Q6P2H8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM53Q6P2H8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM53Q6P2H8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM53Q6P2H8 AC142472.1-201ENST00000612013 1741 ntBASIC21.5■■□□□ 1.03
TMEM53Q6P2H8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM53Q6P2H8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM53Q6P2H8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM53Q6P2H8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM53Q6P2H8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM53Q6P2H8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM53Q6P2H8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM53Q6P2H8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM53Q6P2H8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM53Q6P2H8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM53Q6P2H8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
TMEM53Q6P2H8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM53Q6P2H8 GPX1-201ENST00000419349 1106 ntBASIC21.49■■□□□ 1.03
TMEM53Q6P2H8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.49■■□□□ 1.03
TMEM53Q6P2H8 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.49■■□□□ 1.03
TMEM53Q6P2H8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM53Q6P2H8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TMEM53Q6P2H8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM53Q6P2H8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM53Q6P2H8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.48■■□□□ 1.03
TMEM53Q6P2H8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM53Q6P2H8 AC145676.1-201ENST00000514988 2004 ntBASIC21.48■■□□□ 1.03
TMEM53Q6P2H8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM53Q6P2H8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM53Q6P2H8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.47■■□□□ 1.03
TMEM53Q6P2H8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM53Q6P2H8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.47■■□□□ 1.03
TMEM53Q6P2H8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM53Q6P2H8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM53Q6P2H8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TMEM53Q6P2H8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM53Q6P2H8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TMEM53Q6P2H8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM53Q6P2H8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM53Q6P2H8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.46■■□□□ 1.03
TMEM53Q6P2H8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM53Q6P2H8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TMEM53Q6P2H8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM53Q6P2H8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms