Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PPP4R3AQ6IN85 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
PPP4R3AQ6IN85 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
PPP4R3AQ6IN85 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PPP4R3AQ6IN85 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PPP4R3AQ6IN85 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PPP4R3AQ6IN85 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PPP4R3AQ6IN85 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PPP4R3AQ6IN85 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.15■■□□□ 1.94
PPP4R3AQ6IN85 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
PPP4R3AQ6IN85 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC27.15■■□□□ 1.94
PPP4R3AQ6IN85 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.15■■□□□ 1.94
PPP4R3AQ6IN85 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC27.15■■□□□ 1.94
PPP4R3AQ6IN85 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.15■■□□□ 1.94
PPP4R3AQ6IN85 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.14■■□□□ 1.94
PPP4R3AQ6IN85 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PPP4R3AQ6IN85 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PPP4R3AQ6IN85 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
PPP4R3AQ6IN85 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC27.14■■□□□ 1.94
PPP4R3AQ6IN85 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PPP4R3AQ6IN85 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PPP4R3AQ6IN85 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PPP4R3AQ6IN85 RPS2P7-201ENST00000447334 885 ntBASIC27.13■■□□□ 1.93
PPP4R3AQ6IN85 DUX4L18-201ENST00000553347 1267 ntBASIC27.13■■□□□ 1.93
PPP4R3AQ6IN85 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PPP4R3AQ6IN85 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PPP4R3AQ6IN85 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.12■■□□□ 1.93
PPP4R3AQ6IN85 AC087393.1-201ENST00000582896 145 ntBASIC27.12■■□□□ 1.93
PPP4R3AQ6IN85 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PPP4R3AQ6IN85 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
PPP4R3AQ6IN85 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
PPP4R3AQ6IN85 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
PPP4R3AQ6IN85 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PPP4R3AQ6IN85 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.11■■□□□ 1.93
PPP4R3AQ6IN85 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
PPP4R3AQ6IN85 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.11■■□□□ 1.93
PPP4R3AQ6IN85 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PPP4R3AQ6IN85 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PPP4R3AQ6IN85 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PPP4R3AQ6IN85 AC097639.1-201ENST00000565519 1891 ntBASIC27.1■■□□□ 1.93
PPP4R3AQ6IN85 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PPP4R3AQ6IN85 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PPP4R3AQ6IN85 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
PPP4R3AQ6IN85 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PPP4R3AQ6IN85 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.1■■□□□ 1.93
PPP4R3AQ6IN85 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PPP4R3AQ6IN85 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.1■■□□□ 1.93
PPP4R3AQ6IN85 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC27.09■■□□□ 1.93
PPP4R3AQ6IN85 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.09■■□□□ 1.93
PPP4R3AQ6IN85 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PPP4R3AQ6IN85 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PPP4R3AQ6IN85 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.08■■□□□ 1.93
PPP4R3AQ6IN85 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC27.08■■□□□ 1.93
PPP4R3AQ6IN85 AL033527.3-201ENST00000566366 1196 ntBASIC27.08■■□□□ 1.93
PPP4R3AQ6IN85 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC27.08■■□□□ 1.93
PPP4R3AQ6IN85 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PPP4R3AQ6IN85 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.07■■□□□ 1.92
PPP4R3AQ6IN85 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
PPP4R3AQ6IN85 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PPP4R3AQ6IN85 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PPP4R3AQ6IN85 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.07■■□□□ 1.92
PPP4R3AQ6IN85 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
PPP4R3AQ6IN85 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PPP4R3AQ6IN85 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.06■■□□□ 1.92
PPP4R3AQ6IN85 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PPP4R3AQ6IN85 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.06■■□□□ 1.92
PPP4R3AQ6IN85 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PPP4R3AQ6IN85 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PPP4R3AQ6IN85 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PPP4R3AQ6IN85 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PPP4R3AQ6IN85 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
PPP4R3AQ6IN85 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.05■■□□□ 1.92
PPP4R3AQ6IN85 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC27.05■■□□□ 1.92
PPP4R3AQ6IN85 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4R3AQ6IN85 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4R3AQ6IN85 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4R3AQ6IN85 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4R3AQ6IN85 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4R3AQ6IN85 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.04■■□□□ 1.92
PPP4R3AQ6IN85 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PPP4R3AQ6IN85 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PPP4R3AQ6IN85 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PPP4R3AQ6IN85 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PPP4R3AQ6IN85 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27.03■■□□□ 1.92
PPP4R3AQ6IN85 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.03■■□□□ 1.92
PPP4R3AQ6IN85 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.03■■□□□ 1.92
PPP4R3AQ6IN85 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
PPP4R3AQ6IN85 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PPP4R3AQ6IN85 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PPP4R3AQ6IN85 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
PPP4R3AQ6IN85 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC27.02■■□□□ 1.92
PPP4R3AQ6IN85 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
PPP4R3AQ6IN85 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PPP4R3AQ6IN85 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
PPP4R3AQ6IN85 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
PPP4R3AQ6IN85 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
PPP4R3AQ6IN85 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
PPP4R3AQ6IN85 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
PPP4R3AQ6IN85 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
PPP4R3AQ6IN85 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 195.6 ms