Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
USH1GQ495M9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC27.59■■■□□ 2.01
USH1GQ495M9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
USH1GQ495M9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC27.59■■■□□ 2.01
USH1GQ495M9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.59■■■□□ 2.01
USH1GQ495M9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
USH1GQ495M9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
USH1GQ495M9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
USH1GQ495M9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
USH1GQ495M9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC27.57■■■□□ 2
USH1GQ495M9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
USH1GQ495M9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.56■■■□□ 2
USH1GQ495M9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC27.56■■■□□ 2
USH1GQ495M9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
USH1GQ495M9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
USH1GQ495M9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.55■■■□□ 2
USH1GQ495M9 AC009299.2-201ENST00000482477 511 ntBASIC27.55■■■□□ 2
USH1GQ495M9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.55■■■□□ 2
USH1GQ495M9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
USH1GQ495M9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC27.54■■■□□ 2
USH1GQ495M9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
USH1GQ495M9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
USH1GQ495M9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC27.54■■■□□ 2
USH1GQ495M9 ERN1-208ENST00000606895 2068 ntBASIC27.54■■■□□ 2
USH1GQ495M9 AL031848.2-201ENST00000607670 837 ntBASIC27.54■■■□□ 2
USH1GQ495M9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.53■■■□□ 2
USH1GQ495M9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.53■■■□□ 2
USH1GQ495M9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC27.53■■■□□ 2
USH1GQ495M9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.53■■■□□ 2
USH1GQ495M9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.53■■■□□ 2
USH1GQ495M9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
USH1GQ495M9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.52■■■□□ 2
USH1GQ495M9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.52■■■□□ 2
USH1GQ495M9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
USH1GQ495M9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27.52■■■□□ 2
USH1GQ495M9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC27.52■■■□□ 2
USH1GQ495M9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
USH1GQ495M9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.52■■■□□ 2
USH1GQ495M9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.52■■■□□ 2
USH1GQ495M9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.51■■■□□ 2
USH1GQ495M9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
USH1GQ495M9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
USH1GQ495M9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
USH1GQ495M9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
USH1GQ495M9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC27.51■■□□□ 1.99
USH1GQ495M9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
USH1GQ495M9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC27.51■■□□□ 1.99
USH1GQ495M9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
USH1GQ495M9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
USH1GQ495M9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
USH1GQ495M9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.5■■□□□ 1.99
USH1GQ495M9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
USH1GQ495M9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
USH1GQ495M9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
USH1GQ495M9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.49■■□□□ 1.99
USH1GQ495M9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
USH1GQ495M9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
USH1GQ495M9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
USH1GQ495M9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
USH1GQ495M9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
USH1GQ495M9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
USH1GQ495M9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
USH1GQ495M9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.47■■□□□ 1.99
USH1GQ495M9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
USH1GQ495M9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
USH1GQ495M9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
USH1GQ495M9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC27.47■■□□□ 1.99
USH1GQ495M9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC27.47■■□□□ 1.99
USH1GQ495M9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
USH1GQ495M9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC27.46■■□□□ 1.99
USH1GQ495M9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC27.46■■□□□ 1.99
USH1GQ495M9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC27.46■■□□□ 1.99
USH1GQ495M9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.45■■□□□ 1.99
USH1GQ495M9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC27.45■■□□□ 1.99
USH1GQ495M9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.99
USH1GQ495M9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.99
USH1GQ495M9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC27.45■■□□□ 1.98
USH1GQ495M9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.45■■□□□ 1.98
USH1GQ495M9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
USH1GQ495M9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
USH1GQ495M9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
USH1GQ495M9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.44■■□□□ 1.98
USH1GQ495M9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.43■■□□□ 1.98
USH1GQ495M9 AC096887.2-201ENST00000623443 1957 ntBASIC27.43■■□□□ 1.98
USH1GQ495M9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
USH1GQ495M9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
USH1GQ495M9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
USH1GQ495M9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
USH1GQ495M9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
USH1GQ495M9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
USH1GQ495M9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC27.42■■□□□ 1.98
USH1GQ495M9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
USH1GQ495M9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
USH1GQ495M9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC27.42■■□□□ 1.98
USH1GQ495M9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
USH1GQ495M9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
USH1GQ495M9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
USH1GQ495M9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
USH1GQ495M9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
USH1GQ495M9 AC022616.5-201ENST00000518796 181 ntBASIC27.41■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms