Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.643e-6■■■■□ 23.2
SRSF1Q07955 RNPS1-226ENST00000570051 735 ntTSL 219.04■□□□□ 0.643e-6■■■■□ 23.2
SRSF1Q07955 RNPS1-212ENST00000564822 314 ntTSL 419.04■□□□□ 0.643e-6■■■■□ 23.2
SRSF1Q07955 FAM173A-206ENST00000568916 454 ntTSL 219■□□□□ 0.632e-6■■■■□ 23.2
SRSF1Q07955 RNPS1-210ENST00000564601 903 ntTSL 318.7■□□□□ 0.583e-6■■■■□ 23.2
SRSF1Q07955 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.542e-8■■■■□ 23.2
SRSF1Q07955 ZNF251-204ENST00000530353 2342 ntTSL 218.29■□□□□ 0.521e-6■■■■□ 23.2
SRSF1Q07955 CEP131-205ENST00000570817 1160 ntAPPRIS ALT2 TSL 1 (best)18.14■□□□□ 0.498e-9■■■■□ 23.2
SRSF1Q07955 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.91■□□□□ 0.462e-6■■■■□ 23.2
SRSF1Q07955 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.58■□□□□ 0.412e-6■■■■□ 23.2
SRSF1Q07955 CEP131-207ENST00000573053 1747 ntAPPRIS ALT2 TSL 517.41■□□□□ 0.388e-9■■■■□ 23.2
SRSF1Q07955 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.41■□□□□ 0.383e-6■■■■□ 23.2
SRSF1Q07955 EXOC3-208ENST00000511015 1031 ntTSL 217.4■□□□□ 0.382e-6■■■■□ 23.2
SRSF1Q07955 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.27■□□□□ 0.363e-6■■■■□ 23.2
SRSF1Q07955 C7orf43-203ENST00000419037 2200 ntTSL 517.11■□□□□ 0.332e-6■■■■□ 23.2
SRSF1Q07955 FAM173A-208ENST00000570237 475 ntTSL 216.85■□□□□ 0.292e-6■■■■□ 23.2
SRSF1Q07955 CPSF4-209ENST00000465132 927 ntTSL 216.79■□□□□ 0.282e-6■■■■□ 23.2
SRSF1Q07955 CPSF4-203ENST00000430038 735 ntTSL 516.58■□□□□ 0.244e-7■■■■□ 23.2
SRSF1Q07955 CPSF4-205ENST00000440514 578 ntTSL 316.54■□□□□ 0.242e-6■■■■□ 23.2
SRSF1Q07955 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.238e-7■■■■□ 23.2
SRSF1Q07955 BRD9-201ENST00000466684 1417 ntTSL 216.17■□□□□ 0.188e-7■■■■□ 23.2
SRSF1Q07955 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.132e-6■■■■□ 23.2
SRSF1Q07955 ZNF251-202ENST00000524394 315 ntTSL 515.51■□□□□ 0.071e-6■■■■□ 23.2
SRSF1Q07955 RNPS1-204ENST00000561518 1092 ntTSL 515.38■□□□□ 0.053e-6■■■■□ 23.2
SRSF1Q07955 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.34■□□□□ 0.052e-6■■■■□ 23.2
SRSF1Q07955 RNPS1-209ENST00000564311 870 ntTSL 514.53□□□□□ -0.083e-6■■■■□ 23.2
SRSF1Q07955 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.46□□□□□ -0.093e-6■■■■□ 23.2
SRSF1Q07955 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.124e-7■■■■□ 23.2
SRSF1Q07955 TRIM65-204ENST00000543309 865 ntTSL 214.3□□□□□ -0.122e-6■■■■□ 23.2
SRSF1Q07955 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.132e-8■■■■□ 23.2
SRSF1Q07955 AKAP17A-203ENST00000474361 3232 ntTSL 1 (best)14.13□□□□□ -0.152e-8■■■■□ 23.2
SRSF1Q07955 RNPS1-207ENST00000562690 582 ntTSL 213.9□□□□□ -0.183e-6■■■■□ 23.2
SRSF1Q07955 ZNF251-203ENST00000525191 618 ntTSL 313.84□□□□□ -0.191e-6■■■■□ 23.2
SRSF1Q07955 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.193e-6■■■■□ 23.2
SRSF1Q07955 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.213e-6■■■■□ 23.2
SRSF1Q07955 BRD9-212ENST00000495265 2843 ntTSL 213.73□□□□□ -0.218e-7■■■■□ 23.2
SRSF1Q07955 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.233e-6■■■■□ 23.2
SRSF1Q07955 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.232e-6■■■■□ 23.2
SRSF1Q07955 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.292e-6■■■■□ 23.2
SRSF1Q07955 BRIX1-204ENST00000510960 1161 ntTSL 213.19□□□□□ -0.32e-6■■■■□ 23.2
SRSF1Q07955 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.18□□□□□ -0.463e-6■■■■□ 23.2
SRSF1Q07955 BRD9-206ENST00000487688 753 ntTSL 512.1□□□□□ -0.471e-6■■■■□ 23.2
SRSF1Q07955 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.02□□□□□ -0.492e-6■■■■□ 23.2
SRSF1Q07955 CPSF4-208ENST00000452047 687 ntTSL 311.92□□□□□ -0.52e-6■■■■□ 23.2
SRSF1Q07955 BRD9-208ENST00000489816 3170 ntTSL 1 (best)11.81□□□□□ -0.528e-7■■■■□ 23.2
SRSF1Q07955 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.578e-9■■■■□ 23.2
SRSF1Q07955 TRIM65-205ENST00000591668 644 ntTSL 211.43□□□□□ -0.582e-6■■■■□ 23.2
SRSF1Q07955 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.68e-9■■■■□ 23.2
SRSF1Q07955 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.61e-6■■■■□ 23.2
SRSF1Q07955 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.638e-9■■■■□ 23.2
SRSF1Q07955 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.652e-6■■■■□ 23.2
SRSF1Q07955 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.668e-9■■■■□ 23.2
SRSF1Q07955 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC10.53□□□□□ -0.728e-7■■■■□ 23.2
SRSF1Q07955 BRIX1-202ENST00000506023 743 ntTSL 310.49□□□□□ -0.732e-6■■■■□ 23.2
SRSF1Q07955 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC10.4□□□□□ -0.742e-6■■■■□ 23.2
SRSF1Q07955 CPSF4-212ENST00000482251 574 ntTSL 29.98□□□□□ -0.812e-6■■■■□ 23.2
SRSF1Q07955 CPSF4-213ENST00000484112 825 ntTSL 29.95□□□□□ -0.822e-6■■■■□ 23.2
SRSF1Q07955 CPSF4-211ENST00000471455 569 ntTSL 59.1□□□□□ -0.952e-6■■■■□ 23.2
SRSF1Q07955 BRIX1-205ENST00000515798 2196 ntTSL 28.79□□□□□ -12e-6■■■■□ 23.2
SRSF1Q07955 BRD9-209ENST00000490814 3477 ntTSL 1 (best)8.07□□□□□ -1.128e-7■■■■□ 23.2
SRSF1Q07955 BRIX1-203ENST00000510834 2380 ntTSL 1 (best)8.06□□□□□ -1.122e-6■■■■□ 23.2
SRSF1Q07955 ENPP3-205ENST00000427707 1536 ntTSL 1 (best)7.21□□□□□ -1.262e-6■■■■□ 23.2
SRSF1Q07955 CPSF4-202ENST00000412686 745 ntTSL 57.06□□□□□ -1.282e-6■■■■□ 23.2
SRSF1Q07955 ENPP3-206ENST00000470930 550 ntTSL 56.05□□□□□ -1.442e-6■■■■□ 23.2
SRSF1Q07955 ENPP3-204ENST00000423831 598 ntTSL 35.62□□□□□ -1.512e-6■■■■□ 23.2
SRSF1Q07955 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.51□□□□□ -1.532e-6■■■■□ 23.2
SRSF1Q07955 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.562e-6■■■■□ 23.2
SRSF1Q07955 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.62e-6■■■■□ 23.2
SRSF1Q07955 BRWD1-207ENST00000430093 1656 ntTSL 1 (best)4.37□□□□□ -1.712e-6■■■■□ 23.2
SRSF1Q07955 BRWD1-208ENST00000445245 1682 ntTSL 1 (best)4.37□□□□□ -1.712e-6■■■■□ 23.2
SRSF1Q07955 DROSHA-209ENST00000509608 409 ntTSL 34.3□□□□□ -1.722e-6■■■■□ 23.2
SRSF1Q07955 DROSHA-205ENST00000505601 552 ntTSL 44.3□□□□□ -1.722e-6■■■■□ 23.2
SRSF1Q07955 BRWD1-211ENST00000455867 1644 ntTSL 1 (best)4.1□□□□□ -1.752e-6■■■■□ 23.2
SRSF1Q07955 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.772e-6■■■■□ 23.2
SRSF1Q07955 BRWD1-209ENST00000445668 1593 ntTSL 1 (best)3.99□□□□□ -1.772e-6■■■■□ 23.2
SRSF1Q07955 DROSHA-206ENST00000507174 572 ntTSL 43.96□□□□□ -1.782e-6■■■■□ 23.2
SRSF1Q07955 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.67□□□□□ -1.822e-6■■■■□ 23.2
SRSF1Q07955 BRWD1-205ENST00000412604 1756 ntTSL 1 (best)3.46□□□□□ -1.862e-6■■■■□ 23.2
SRSF1Q07955 BRWD1-210ENST00000446924 4990 ntTSL 22.93□□□□□ -1.942e-6■■■■□ 23.2
SRSF1Q07955 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.76□□□□□ -0.058e-7■■■■□ 23.1
SRSF1Q07955 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.378e-7■■■■□ 23.1
SRSF1Q07955 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.68e-7■■■■□ 23.1
SRSF1Q07955 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.328e-7■■■■□ 23.1
SRSF1Q07955 CYCS-204ENST00000413447 498 ntTSL 312.53□□□□□ -0.48e-7■■■■□ 23.1
SRSF1Q07955 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.48e-7■■■■□ 23.1
SRSF1Q07955 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.38e-7■■■■□ 23.1
SRSF1Q07955 NEU1-208ENST00000491768 1875 ntTSL 515.76■□□□□ 0.115e-9■■■■□ 23.1
SRSF1Q07955 NEU1-207ENST00000480384 2214 ntTSL 213.68□□□□□ -0.225e-9■■■■□ 23.1
SRSF1Q07955 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.245e-9■■■■□ 23.1
SRSF1Q07955 NEU1-209ENST00000495807 4616 ntTSL 210.38□□□□□ -0.755e-9■■■■□ 23.1
SRSF1Q07955 RAPGEF5-211ENST00000497668 383 ntTSL 317.58■□□□□ 0.43e-7■■■■□ 23.1
SRSF1Q07955 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.11□□□□□ -0.153e-7■■■■□ 23.1
SRSF1Q07955 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.473e-7■■■■□ 23.1
SRSF1Q07955 KIFC2-202ENST00000529644 695 ntTSL 318.44■□□□□ 0.541e-8■■■■□ 23
SRSF1Q07955 KIF12-204ENST00000491059 367 ntTSL 316.75■□□□□ 0.278e-8■■■■□ 23
SRSF1Q07955 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.188e-8■■■■□ 23
SRSF1Q07955 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.158e-8■■■■□ 23
SRSF1Q07955 KIFC2-206ENST00000533114 786 ntTSL 315.76■□□□□ 0.111e-8■■■■□ 23
SRSF1Q07955 KIF12-206ENST00000639832 2564 ntTSL 214.59□□□□□ -0.078e-8■■■■□ 23
SRSF1Q07955 KIF12-208ENST00000640553 2003 ntTSL 1 (best)12.28□□□□□ -0.448e-8■■■■□ 23
Retrieved 100 of 14,836 protein–RNA pairs in 638 ms