RNA–Protein interactions for RNA: ENST00000455867.5

BRWD1-211, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

TSL 1 (best)

Gene BRWD1, Length 1,644 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-211ENST00000455867 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
BRWD1-211ENST00000455867 AEBP2Q6ZN18 517 aaPredicted RBP16.96■□□□□ 0.31
BRWD1-211ENST00000455867 PHF23Q9BUL5 403 aaPredicted RBP14.96□□□□□ -0.01
BRWD1-211ENST00000455867 SENP3Q9H4L4 574 aaPredicted RBP14.39□□□□□ -0.11
BRWD1-211ENST00000455867 PLPPR3Q6T4P5 718 aa14.01□□□□□ -0.17
BRWD1-211ENST00000455867 FOXD1Q16676 465 aa13.26□□□□□ -0.29
BRWD1-211ENST00000455867 ADRA2BP18089 450 aa13.08□□□□□ -0.32
BRWD1-211ENST00000455867 PPP6R1Q9UPN7 881 aa13.06□□□□□ -0.32
BRWD1-211ENST00000455867 PIAS4Q8N2W9 510 aaPredicted RBP12.63□□□□□ -0.39
BRWD1-211ENST00000455867 KCNA4P22459 653 aa12.55□□□□□ -0.4
BRWD1-211ENST00000455867 PPP4R3CPQ6ZMV5 832 aa12.37□□□□□ -0.43
BRWD1-211ENST00000455867 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.46
BRWD1-211ENST00000455867 EHMT2Q96KQ7 1210 aa12.15□□□□□ -0.46
BRWD1-211ENST00000455867 MSH5O43196 834 aa12.12□□□□□ -0.47
BRWD1-211ENST00000455867 SLC4A1APQ9BWU0 796 aaKnown RBP12.04□□□□□ -0.48
BRWD1-211ENST00000455867 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
BRWD1-211ENST00000455867 NPM3O75607 178 aaKnown RBP11.99□□□□□ -0.49
BRWD1-211ENST00000455867 CNKSR2Q8WXI2 1034 aa11.96□□□□□ -0.5
BRWD1-211ENST00000455867 CSRNP3Q8WYN3 585 aa11.82□□□□□ -0.52
BRWD1-211ENST00000455867 MAPK8IP2Q13387 824 aaPredicted RBP11.73□□□□□ -0.53
BRWD1-211ENST00000455867 POTEDQ86YR6 584 aa11.72□□□□□ -0.53
BRWD1-211ENST00000455867 RNF216Q9NWF9 866 aaPredicted RBP11.62□□□□□ -0.55
BRWD1-211ENST00000455867 DNAJC5BQ9UF47 199 aa11.62□□□□□ -0.55
BRWD1-211ENST00000455867 ZBTB22O15209 634 aa11.53□□□□□ -0.56
BRWD1-211ENST00000455867 DMRT2Q9Y5R5 561 aa11.53□□□□□ -0.56
BRWD1-211ENST00000455867 FOXD4L1Q9NU39 408 aa11.46□□□□□ -0.57
BRWD1-211ENST00000455867 HOXD11P31277 338 aaPredicted RBP11.46□□□□□ -0.58
BRWD1-211ENST00000455867 SLC4A2P04920 1241 aa11.2□□□□□ -0.62
BRWD1-211ENST00000455867 MYCNP04198 464 aaPredicted RBP11.1□□□□□ -0.63
BRWD1-211ENST00000455867 ATXN8OSP0DMR3 200 aa11.04□□□□□ -0.64
BRWD1-211ENST00000455867 DCAF8L1A6NGE4 600 aa11.01□□□□□ -0.65
BRWD1-211ENST00000455867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.93□□□□□ -0.661e-9■□□□□ 10
BRWD1-211ENST00000455867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.84□□□□□ -0.67
BRWD1-211ENST00000455867 HNRNPUL2Q1KMD3 747 aaKnown RBP10.84□□□□□ -0.67
BRWD1-211ENST00000455867 SAMD1Q6SPF0 538 aaPredicted RBP10.81□□□□□ -0.68
BRWD1-211ENST00000455867 U3KPZ7 1027 aaPredicted RBP10.78□□□□□ -0.68
BRWD1-211ENST00000455867 ATF5Q9Y2D1 282 aaPredicted RBP10.72□□□□□ -0.69
BRWD1-211ENST00000455867 FKBP8Q14318 412 aa10.67□□□□□ -0.7
BRWD1-211ENST00000455867 APLP2Q06481 763 aa10.65□□□□□ -0.7
BRWD1-211ENST00000455867 ZNF219Q9P2Y4 722 aaPredicted RBP10.54□□□□□ -0.72
BRWD1-211ENST00000455867 AMER1Q5JTC6 1135 aaPredicted RBP10.49□□□□□ -0.73
BRWD1-211ENST00000455867 RTN4Q9NQC3 1192 aaKnown RBP10.42□□□□□ -0.74
BRWD1-211ENST00000455867 RNF39Q9H2S5 420 aa10.4□□□□□ -0.75
BRWD1-211ENST00000455867 TRHP20396 242 aaPredicted RBP10.35□□□□□ -0.75
BRWD1-211ENST00000455867 SPINK5Q9NQ38 1064 aaPredicted RBP10.34□□□□□ -0.75
BRWD1-211ENST00000455867 C1QBPQ07021 282 aaKnown RBP10.32□□□□□ -0.76
BRWD1-211ENST00000455867 CAPN15O75808 1086 aa10.31□□□□□ -0.76
BRWD1-211ENST00000455867 FBLN2P98095 1184 aa10.31□□□□□ -0.76
BRWD1-211ENST00000455867 SPDYE4A6NLX3 237 aa10.28□□□□□ -0.76
BRWD1-211ENST00000455867 MKRN4PQ13434 485 aaPredicted RBP10.28□□□□□ -0.76
BRWD1-211ENST00000455867 POLA2Q14181 598 aa10.27□□□□□ -0.77
BRWD1-211ENST00000455867 FBXO3Q9UK99 471 aa10.22□□□□□ -0.77
BRWD1-211ENST00000455867 ZBTB12Q9Y330 459 aaPredicted RBP10.19□□□□□ -0.78
BRWD1-211ENST00000455867 PROM2Q8N271 834 aa10.17□□□□□ -0.78
BRWD1-211ENST00000455867 ABCB7O75027 752 aa10.13□□□□□ -0.79
BRWD1-211ENST00000455867 SLC24A1O60721 1099 aa10.11□□□□□ -0.79
BRWD1-211ENST00000455867 VASPP50552 380 aaPredicted RBP10.04□□□□□ -0.8
BRWD1-211ENST00000455867 DSG3P32926 999 aa10.03□□□□□ -0.8
BRWD1-211ENST00000455867 SPDYE2BA6NHP3 402 aa9.93□□□□□ -0.82
BRWD1-211ENST00000455867 SPDYE6P0CI01 402 aa9.93□□□□□ -0.82
BRWD1-211ENST00000455867 SPDYE2Q495Y8 402 aa9.93□□□□□ -0.82
BRWD1-211ENST00000455867 ZNF692Q9BU19 519 aaPredicted RBP9.93□□□□□ -0.82
BRWD1-211ENST00000455867 IFNLR1Q8IU57 520 aaPredicted RBP9.92□□□□□ -0.82
BRWD1-211ENST00000455867 OSCARQ8IYS5 282 aa9.91□□□□□ -0.82
BRWD1-211ENST00000455867 SSUH2Q9Y2M2 353 aa9.88□□□□□ -0.83
BRWD1-211ENST00000455867 STAG3Q9UJ98 1225 aa9.85□□□□□ -0.83
BRWD1-211ENST00000455867 CACNB1Q02641 598 aaPredicted RBP9.83□□□□□ -0.84
BRWD1-211ENST00000455867 PABPN1Q86U42 306 aaKnown RBP eCLIP9.81□□□□□ -0.84
BRWD1-211ENST00000455867 KLHL34Q8N239 644 aa9.78□□□□□ -0.84
BRWD1-211ENST00000455867 SPOCK2Q92563 424 aa9.76□□□□□ -0.85
BRWD1-211ENST00000455867 PLCD3Q8N3E9 789 aa9.75□□□□□ -0.85
BRWD1-211ENST00000455867 PKD2Q13563 968 aa9.74□□□□□ -0.85
BRWD1-211ENST00000455867 DCAF8L2P0C7V8 631 aa9.71□□□□□ -0.85
BRWD1-211ENST00000455867 MIER1Q8N108 512 aa9.7□□□□□ -0.86
BRWD1-211ENST00000455867 PLEKHG5O94827 1062 aa9.67□□□□□ -0.86
BRWD1-211ENST00000455867 PLCB2Q00722 1185 aa9.67□□□□□ -0.86
BRWD1-211ENST00000455867 ZBTB47Q9UFB7 747 aaPredicted RBP9.65□□□□□ -0.86
BRWD1-211ENST00000455867 ECM2O94769 699 aaPredicted RBP9.64□□□□□ -0.87
BRWD1-211ENST00000455867 RBM42Q9BTD8 480 aaKnown RBP9.6□□□□□ -0.87
BRWD1-211ENST00000455867 AKT1S1Q96B36 256 aa9.55□□□□□ -0.88
BRWD1-211ENST00000455867 SPDYE1Q8NFV5 336 aaPredicted RBP9.54□□□□□ -0.88
BRWD1-211ENST00000455867 CIZ1Q9ULV3 898 aaPredicted RBP9.53□□□□□ -0.88
BRWD1-211ENST00000455867 HAP1P54257 671 aaPredicted RBP9.52□□□□□ -0.89
BRWD1-211ENST00000455867 RGL2O15211 777 aa9.5□□□□□ -0.89
BRWD1-211ENST00000455867 TRIM41Q8WV44 630 aa9.5□□□□□ -0.89
BRWD1-211ENST00000455867 BBXQ8WY36 941 aaPredicted RBP9.5□□□□□ -0.89
BRWD1-211ENST00000455867 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.5□□□□□ -0.89
BRWD1-211ENST00000455867 GSE1Q14687 1217 aa9.45□□□□□ -0.9
BRWD1-211ENST00000455867 CLEC11AQ9Y240 323 aa9.45□□□□□ -0.9
BRWD1-211ENST00000455867 NPM1P06748 294 aaKnown RBP eCLIP9.44□□□□□ -0.9
BRWD1-211ENST00000455867 PRR29P0C7W0 189 aa9.43□□□□□ -0.9
BRWD1-211ENST00000455867 REM2Q8IYK8 340 aaPredicted RBP9.42□□□□□ -0.9
BRWD1-211ENST00000455867 NUBP1P53384 320 aa9.4□□□□□ -0.9
BRWD1-211ENST00000455867 PAXIP1Q6ZW49 1069 aaPredicted RBP9.39□□□□□ -0.91
BRWD1-211ENST00000455867 VSIG10Q8N0Z9 540 aa9.39□□□□□ -0.91
BRWD1-211ENST00000455867 CREBZFQ9NS37 354 aa9.39□□□□□ -0.91
BRWD1-211ENST00000455867 CHGAP10645 457 aaKnown RBP9.38□□□□□ -0.91
BRWD1-211ENST00000455867 CFAP44Q96MT7 982 aa9.38□□□□□ -0.91
BRWD1-211ENST00000455867 DCAF8Q5TAQ9 597 aa9.36□□□□□ -0.91
BRWD1-211ENST00000455867 FAM212AQ96EL1 285 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms