RNA–Protein interactions for RNA: ENST00000445668.5

BRWD1-209, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

TSL 1 (best)

Gene BRWD1, Length 1,593 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-209ENST00000445668 AEBP2Q6ZN18 517 aaPredicted RBP21.3■■□□□ 1
BRWD1-209ENST00000445668 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.8
BRWD1-209ENST00000445668 SENP3Q9H4L4 574 aaPredicted RBP18.43■□□□□ 0.54
BRWD1-209ENST00000445668 PHF23Q9BUL5 403 aaPredicted RBP18.04■□□□□ 0.48
BRWD1-209ENST00000445668 FOXD1Q16676 465 aa17.16■□□□□ 0.34
BRWD1-209ENST00000445668 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
BRWD1-209ENST00000445668 MSH5O43196 834 aa16.46■□□□□ 0.23
BRWD1-209ENST00000445668 PIAS4Q8N2W9 510 aaPredicted RBP15.94■□□□□ 0.14
BRWD1-209ENST00000445668 PPP6R1Q9UPN7 881 aa15.47■□□□□ 0.07
BRWD1-209ENST00000445668 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
BRWD1-209ENST00000445668 ADRA2BP18089 450 aa15.42■□□□□ 0.06
BRWD1-209ENST00000445668 CACNB1Q02641 598 aaPredicted RBP14.53□□□□□ -0.08
BRWD1-209ENST00000445668 DMRT2Q9Y5R5 561 aa14.47□□□□□ -0.09
BRWD1-209ENST00000445668 MAPK8IP2Q13387 824 aaPredicted RBP14.35□□□□□ -0.11
BRWD1-209ENST00000445668 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
BRWD1-209ENST00000445668 DCAF8L1A6NGE4 600 aa13.98□□□□□ -0.17
BRWD1-209ENST00000445668 RNF39Q9H2S5 420 aa13.89□□□□□ -0.19
BRWD1-209ENST00000445668 C1QBPQ07021 282 aaKnown RBP13.72□□□□□ -0.21
BRWD1-209ENST00000445668 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
BRWD1-209ENST00000445668 PPP4R3CPQ6ZMV5 832 aa13.5□□□□□ -0.25
BRWD1-209ENST00000445668 RNF216Q9NWF9 866 aaPredicted RBP13.41□□□□□ -0.26
BRWD1-209ENST00000445668 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
BRWD1-209ENST00000445668 CNKSR2Q8WXI2 1034 aa13.37□□□□□ -0.27
BRWD1-209ENST00000445668 POTEHQ6S545 545 aa13.32□□□□□ -0.28
BRWD1-209ENST00000445668 KCNA4P22459 653 aa13.29□□□□□ -0.28
BRWD1-209ENST00000445668 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
BRWD1-209ENST00000445668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.09□□□□□ -0.311e-9■□□□□ 10
BRWD1-209ENST00000445668 NPM3O75607 178 aaKnown RBP12.98□□□□□ -0.33
BRWD1-209ENST00000445668 DSG3P32926 999 aa12.77□□□□□ -0.36
BRWD1-209ENST00000445668 CAPN15O75808 1086 aa12.76□□□□□ -0.37
BRWD1-209ENST00000445668 SLC4A1APQ9BWU0 796 aaKnown RBP12.67□□□□□ -0.38
BRWD1-209ENST00000445668 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
BRWD1-209ENST00000445668 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
BRWD1-209ENST00000445668 APLP2Q06481 763 aa12.43□□□□□ -0.42
BRWD1-209ENST00000445668 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
BRWD1-209ENST00000445668 TRHP20396 242 aaPredicted RBP12.38□□□□□ -0.43
BRWD1-209ENST00000445668 ZNF219Q9P2Y4 722 aaPredicted RBP12.37□□□□□ -0.43
BRWD1-209ENST00000445668 ABCB7O75027 752 aa12.35□□□□□ -0.43
BRWD1-209ENST00000445668 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
BRWD1-209ENST00000445668 CHRDL2Q6WN34 429 aa12.25□□□□□ -0.45
BRWD1-209ENST00000445668 SLC4A2P04920 1241 aa12.23□□□□□ -0.45
BRWD1-209ENST00000445668 ZBTB22O15209 634 aa12.22□□□□□ -0.45
BRWD1-209ENST00000445668 CSRNP3Q8WYN3 585 aa12.22□□□□□ -0.45
BRWD1-209ENST00000445668 FOXD4L1Q9NU39 408 aa12.21□□□□□ -0.46
BRWD1-209ENST00000445668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
BRWD1-209ENST00000445668 HNRNPUL2Q1KMD3 747 aaKnown RBP12.2□□□□□ -0.46
BRWD1-209ENST00000445668 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
BRWD1-209ENST00000445668 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
BRWD1-209ENST00000445668 MYCNP04198 464 aaPredicted RBP11.99□□□□□ -0.49
BRWD1-209ENST00000445668 POLA2Q14181 598 aa11.87□□□□□ -0.51
BRWD1-209ENST00000445668 AKT1S1Q96B36 256 aa11.86□□□□□ -0.51
BRWD1-209ENST00000445668 HAX1O00165 279 aa11.83□□□□□ -0.52
BRWD1-209ENST00000445668 PIP4P2Q8N4L2 257 aa11.78□□□□□ -0.52
BRWD1-209ENST00000445668 ATXN8OSP0DMR3 200 aa11.75□□□□□ -0.53
BRWD1-209ENST00000445668 REM2Q8IYK8 340 aaPredicted RBP11.7□□□□□ -0.54
BRWD1-209ENST00000445668 ZBTB12Q9Y330 459 aaPredicted RBP11.67□□□□□ -0.54
BRWD1-209ENST00000445668 ATF5Q9Y2D1 282 aaPredicted RBP11.67□□□□□ -0.54
BRWD1-209ENST00000445668 FXR2P51116 673 aaKnown RBP eCLIP11.61□□□□□ -0.55
BRWD1-209ENST00000445668 PITPNM1O00562 1244 aa11.56□□□□□ -0.56
BRWD1-209ENST00000445668 EVX2Q03828 476 aa11.48□□□□□ -0.57
BRWD1-209ENST00000445668 OSCARQ8IYS5 282 aa11.48□□□□□ -0.57
BRWD1-209ENST00000445668 LHX8Q68G74 356 aa11.42□□□□□ -0.58
BRWD1-209ENST00000445668 PRKAR2AP13861 404 aaKnown RBP11.3□□□□□ -0.6
BRWD1-209ENST00000445668 PLSCR2Q9NRY7 297 aa11.29□□□□□ -0.6
BRWD1-209ENST00000445668 GABBR2O75899 941 aa11.27□□□□□ -0.61
BRWD1-209ENST00000445668 C19orf67A6NJJ6 358 aa11.26□□□□□ -0.61
BRWD1-209ENST00000445668 CLEC11AQ9Y240 323 aa11.2□□□□□ -0.62
BRWD1-209ENST00000445668 SPDYE2BA6NHP3 402 aa11.2□□□□□ -0.62
BRWD1-209ENST00000445668 SPDYE6P0CI01 402 aa11.2□□□□□ -0.62
BRWD1-209ENST00000445668 SPDYE2Q495Y8 402 aa11.2□□□□□ -0.62
BRWD1-209ENST00000445668 SPDYE1Q8NFV5 336 aaPredicted RBP11.2□□□□□ -0.62
BRWD1-209ENST00000445668 FBLN2P98095 1184 aa11.18□□□□□ -0.62
BRWD1-209ENST00000445668 MKRN4PQ13434 485 aaPredicted RBP11.16□□□□□ -0.62
BRWD1-209ENST00000445668 FKBP8Q14318 412 aa11.07□□□□□ -0.64
BRWD1-209ENST00000445668 CLCN6P51797 869 aa11□□□□□ -0.65
BRWD1-209ENST00000445668 CHADLQ6NUI6 762 aa10.98□□□□□ -0.65
BRWD1-209ENST00000445668 SPDYE4A6NLX3 237 aa10.97□□□□□ -0.65
BRWD1-209ENST00000445668 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
BRWD1-209ENST00000445668 POTEIP0CG38 1075 aa10.95□□□□□ -0.66
BRWD1-209ENST00000445668 PRR29P0C7W0 189 aa10.93□□□□□ -0.66
BRWD1-209ENST00000445668 DCBLD2Q96PD2 775 aa10.91□□□□□ -0.66
BRWD1-209ENST00000445668 CD44P16070 742 aaKnown RBP10.9□□□□□ -0.66
BRWD1-209ENST00000445668 SSUH2Q9Y2M2 353 aa10.9□□□□□ -0.66
BRWD1-209ENST00000445668 POTEMA6NI47 508 aa10.78□□□□□ -0.68
BRWD1-209ENST00000445668 FARP1Q9Y4F1 1045 aaPredicted RBP10.78□□□□□ -0.68
BRWD1-209ENST00000445668 PROM2Q8N271 834 aa10.77□□□□□ -0.69
BRWD1-209ENST00000445668 PABPN1Q86U42 306 aaKnown RBP eCLIP10.74□□□□□ -0.69
BRWD1-209ENST00000445668 PCDH10Q9P2E7 1040 aa10.74□□□□□ -0.69
BRWD1-209ENST00000445668 POTEGQ6S5H5 508 aa10.73□□□□□ -0.69
BRWD1-209ENST00000445668 OTUD5Q96G74 571 aa10.72□□□□□ -0.69
BRWD1-209ENST00000445668 ZNF579Q8NAF0 562 aaKnown RBP10.69□□□□□ -0.7
BRWD1-209ENST00000445668 ZRANB1Q9UGI0 708 aa10.66□□□□□ -0.7
BRWD1-209ENST00000445668 FBXO3Q9UK99 471 aa10.64□□□□□ -0.71
BRWD1-209ENST00000445668 POTEB2H3BUK9 544 aa10.57□□□□□ -0.72
BRWD1-209ENST00000445668 GALR2O43603 387 aaPredicted RBP10.56□□□□□ -0.72
BRWD1-209ENST00000445668 STAG3Q9UJ98 1225 aa10.56□□□□□ -0.72
BRWD1-209ENST00000445668 PAK3O75914 559 aaPredicted RBP10.52□□□□□ -0.73
BRWD1-209ENST00000445668 VASPP50552 380 aaPredicted RBP10.49□□□□□ -0.73
BRWD1-209ENST00000445668 MAMSTRQ6ZN01 415 aa10.48□□□□□ -0.73
BRWD1-209ENST00000445668 FAM163AQ96GL9 167 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms