Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.69■□□□□ 0.9
SEC61A1P61619 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SEC61A1P61619 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.69■□□□□ 0.9
SEC61A1P61619 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEC61A1P61619 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.68■□□□□ 0.9
SEC61A1P61619 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEC61A1P61619 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.68■□□□□ 0.9
SEC61A1P61619 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SEC61A1P61619 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.68■□□□□ 0.9
SEC61A1P61619 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SEC61A1P61619 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.68■□□□□ 0.9
SEC61A1P61619 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEC61A1P61619 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEC61A1P61619 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.67■□□□□ 0.9
SEC61A1P61619 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SEC61A1P61619 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEC61A1P61619 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEC61A1P61619 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEC61A1P61619 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEC61A1P61619 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEC61A1P61619 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEC61A1P61619 ECEL1P2-201ENST00000461596 1295 ntBASIC20.66■□□□□ 0.9
SEC61A1P61619 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEC61A1P61619 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEC61A1P61619 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEC61A1P61619 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.65■□□□□ 0.9
SEC61A1P61619 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEC61A1P61619 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEC61A1P61619 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.65■□□□□ 0.9
SEC61A1P61619 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.64■□□□□ 0.9
SEC61A1P61619 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.64■□□□□ 0.89
SEC61A1P61619 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEC61A1P61619 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEC61A1P61619 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.64■□□□□ 0.89
SEC61A1P61619 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEC61A1P61619 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEC61A1P61619 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEC61A1P61619 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEC61A1P61619 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEC61A1P61619 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEC61A1P61619 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEC61A1P61619 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEC61A1P61619 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.62■□□□□ 0.89
SEC61A1P61619 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEC61A1P61619 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEC61A1P61619 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEC61A1P61619 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
SEC61A1P61619 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.62■□□□□ 0.89
SEC61A1P61619 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEC61A1P61619 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SEC61A1P61619 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEC61A1P61619 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SEC61A1P61619 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEC61A1P61619 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.61■□□□□ 0.89
SEC61A1P61619 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEC61A1P61619 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEC61A1P61619 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SEC61A1P61619 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEC61A1P61619 NTF6A-201ENST00000591175 560 ntBASIC20.6■□□□□ 0.89
SEC61A1P61619 U85056.1-201ENST00000616429 682 ntBASIC20.6■□□□□ 0.89
SEC61A1P61619 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SEC61A1P61619 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEC61A1P61619 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEC61A1P61619 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEC61A1P61619 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEC61A1P61619 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEC61A1P61619 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.59■□□□□ 0.89
SEC61A1P61619 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SEC61A1P61619 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SEC61A1P61619 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEC61A1P61619 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.59■□□□□ 0.89
SEC61A1P61619 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEC61A1P61619 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SEC61A1P61619 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.58■□□□□ 0.88
SEC61A1P61619 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SEC61A1P61619 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEC61A1P61619 WHAMMP3-201ENST00000611636 1609 ntBASIC20.57■□□□□ 0.88
SEC61A1P61619 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEC61A1P61619 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEC61A1P61619 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
SEC61A1P61619 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEC61A1P61619 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.57■□□□□ 0.88
SEC61A1P61619 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEC61A1P61619 LINC00543-201ENST00000567234 1845 ntBASIC20.57■□□□□ 0.88
SEC61A1P61619 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SEC61A1P61619 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEC61A1P61619 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEC61A1P61619 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEC61A1P61619 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEC61A1P61619 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.56■□□□□ 0.88
SEC61A1P61619 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SEC61A1P61619 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEC61A1P61619 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.56■□□□□ 0.88
SEC61A1P61619 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEC61A1P61619 SMPD5-203ENST00000639008 1464 ntBASIC20.56■□□□□ 0.88
SEC61A1P61619 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.55■□□□□ 0.88
SEC61A1P61619 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SEC61A1P61619 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SEC61A1P61619 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.55■□□□□ 0.88
SEC61A1P61619 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms