Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD40P25942 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CD40P25942 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD40P25942 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD40P25942 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.68■□□□□ 0.9
CD40P25942 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CD40P25942 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.68■□□□□ 0.9
CD40P25942 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD40P25942 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CD40P25942 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CD40P25942 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CD40P25942 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD40P25942 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD40P25942 AC022616.5-201ENST00000518796 181 ntBASIC20.67■□□□□ 0.9
CD40P25942 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.67■□□□□ 0.9
CD40P25942 AL121749.1-202ENST00000609313 2153 ntBASIC20.67■□□□□ 0.9
CD40P25942 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.67■□□□□ 0.9
CD40P25942 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CD40P25942 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
CD40P25942 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD40P25942 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD40P25942 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CD40P25942 AC009299.2-201ENST00000482477 511 ntBASIC20.66■□□□□ 0.9
CD40P25942 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD40P25942 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.66■□□□□ 0.9
CD40P25942 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CD40P25942 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD40P25942 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD40P25942 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD40P25942 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD40P25942 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.65■□□□□ 0.9
CD40P25942 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD40P25942 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD40P25942 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CD40P25942 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD40P25942 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD40P25942 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CD40P25942 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD40P25942 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CD40P25942 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.64■□□□□ 0.89
CD40P25942 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD40P25942 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.63■□□□□ 0.89
CD40P25942 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CD40P25942 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.63■□□□□ 0.89
CD40P25942 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD40P25942 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.63■□□□□ 0.89
CD40P25942 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD40P25942 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD40P25942 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CD40P25942 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD40P25942 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD40P25942 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.62■□□□□ 0.89
CD40P25942 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.62■□□□□ 0.89
CD40P25942 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD40P25942 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CD40P25942 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD40P25942 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD40P25942 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD40P25942 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD40P25942 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD40P25942 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CD40P25942 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD40P25942 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.61■□□□□ 0.89
CD40P25942 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD40P25942 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.61■□□□□ 0.89
CD40P25942 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD40P25942 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD40P25942 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD40P25942 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.6■□□□□ 0.89
CD40P25942 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CD40P25942 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.6■□□□□ 0.89
CD40P25942 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD40P25942 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CD40P25942 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.59■□□□□ 0.89
CD40P25942 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD40P25942 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.59■□□□□ 0.89
CD40P25942 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD40P25942 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD40P25942 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD40P25942 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CD40P25942 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.58■□□□□ 0.89
CD40P25942 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD40P25942 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.58■□□□□ 0.89
CD40P25942 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.58■□□□□ 0.89
CD40P25942 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
CD40P25942 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CD40P25942 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.58■□□□□ 0.89
CD40P25942 AL592295.1-201ENST00000400984 884 ntBASIC20.58■□□□□ 0.89
CD40P25942 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.58■□□□□ 0.88
CD40P25942 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.57■□□□□ 0.88
CD40P25942 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD40P25942 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CD40P25942 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.57■□□□□ 0.88
CD40P25942 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CD40P25942 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD40P25942 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CD40P25942 ERN1-208ENST00000606895 2068 ntBASIC20.57■□□□□ 0.88
CD40P25942 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.56■□□□□ 0.88
CD40P25942 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CD40P25942 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms