Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PF4V1P10720 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.84■□□□□ 0.61
PF4V1P10720 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PF4V1P10720 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PF4V1P10720 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PF4V1P10720 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PF4V1P10720 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.83■□□□□ 0.6
PF4V1P10720 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.83■□□□□ 0.6
PF4V1P10720 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.83■□□□□ 0.6
PF4V1P10720 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
PF4V1P10720 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PF4V1P10720 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.82■□□□□ 0.6
PF4V1P10720 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PF4V1P10720 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PF4V1P10720 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PF4V1P10720 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PF4V1P10720 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.82■□□□□ 0.6
PF4V1P10720 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PF4V1P10720 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.82■□□□□ 0.6
PF4V1P10720 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PF4V1P10720 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PF4V1P10720 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PF4V1P10720 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PF4V1P10720 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.81■□□□□ 0.6
PF4V1P10720 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PF4V1P10720 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PF4V1P10720 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PF4V1P10720 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PF4V1P10720 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PF4V1P10720 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PF4V1P10720 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PF4V1P10720 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PF4V1P10720 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PF4V1P10720 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.79■□□□□ 0.6
PF4V1P10720 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PF4V1P10720 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.79■□□□□ 0.6
PF4V1P10720 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PF4V1P10720 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PF4V1P10720 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
PF4V1P10720 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PF4V1P10720 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PF4V1P10720 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PF4V1P10720 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PF4V1P10720 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.78■□□□□ 0.6
PF4V1P10720 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PF4V1P10720 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PF4V1P10720 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PF4V1P10720 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PF4V1P10720 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PF4V1P10720 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PF4V1P10720 AC092803.2-201ENST00000564287 1899 ntBASIC18.77■□□□□ 0.6
PF4V1P10720 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PF4V1P10720 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PF4V1P10720 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.77■□□□□ 0.6
PF4V1P10720 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PF4V1P10720 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.77■□□□□ 0.6
PF4V1P10720 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.77■□□□□ 0.59
PF4V1P10720 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.77■□□□□ 0.59
PF4V1P10720 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PF4V1P10720 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PF4V1P10720 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PF4V1P10720 KRT18P10-201ENST00000388836 1287 ntBASIC18.76■□□□□ 0.59
PF4V1P10720 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PF4V1P10720 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.76■□□□□ 0.59
PF4V1P10720 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.76■□□□□ 0.59
PF4V1P10720 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.76■□□□□ 0.59
PF4V1P10720 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PF4V1P10720 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PF4V1P10720 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PF4V1P10720 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PF4V1P10720 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PF4V1P10720 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PF4V1P10720 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.75■□□□□ 0.59
PF4V1P10720 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.75■□□□□ 0.59
PF4V1P10720 AC009299.2-201ENST00000482477 511 ntBASIC18.75■□□□□ 0.59
PF4V1P10720 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.75■□□□□ 0.59
PF4V1P10720 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PF4V1P10720 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PF4V1P10720 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PF4V1P10720 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PF4V1P10720 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PF4V1P10720 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.75■□□□□ 0.59
PF4V1P10720 ERN1-208ENST00000606895 2068 ntBASIC18.75■□□□□ 0.59
PF4V1P10720 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PF4V1P10720 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PF4V1P10720 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PF4V1P10720 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PF4V1P10720 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.74■□□□□ 0.59
PF4V1P10720 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PF4V1P10720 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PF4V1P10720 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PF4V1P10720 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PF4V1P10720 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.74■□□□□ 0.59
PF4V1P10720 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PF4V1P10720 PVT1_1.1-201ENST00000615125 194 ntBASIC18.74■□□□□ 0.59
PF4V1P10720 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PF4V1P10720 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PF4V1P10720 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.73■□□□□ 0.59
PF4V1P10720 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PF4V1P10720 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms