Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.37■■□□□ 1.97
HOXC6P09630 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
HOXC6P09630 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.36■■□□□ 1.97
HOXC6P09630 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
HOXC6P09630 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
HOXC6P09630 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.36■■□□□ 1.97
HOXC6P09630 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.36■■□□□ 1.97
HOXC6P09630 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
HOXC6P09630 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.36■■□□□ 1.97
HOXC6P09630 AC092028.1-203ENST00000608262 953 ntBASIC27.36■■□□□ 1.97
HOXC6P09630 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
HOXC6P09630 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
HOXC6P09630 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
HOXC6P09630 LINC01003-201ENST00000564834 1764 ntBASIC27.35■■□□□ 1.97
HOXC6P09630 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
HOXC6P09630 MIR638-201ENST00000385237 100 ntBASIC27.35■■□□□ 1.97
HOXC6P09630 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
HOXC6P09630 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
HOXC6P09630 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
HOXC6P09630 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.34■■□□□ 1.97
HOXC6P09630 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.34■■□□□ 1.97
HOXC6P09630 TSPY9P-201ENST00000440215 945 ntBASIC27.34■■□□□ 1.97
HOXC6P09630 TSPY11P-201ENST00000442607 1045 ntBASIC27.34■■□□□ 1.97
HOXC6P09630 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.34■■□□□ 1.97
HOXC6P09630 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
HOXC6P09630 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
HOXC6P09630 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
HOXC6P09630 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27.33■■□□□ 1.97
HOXC6P09630 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HOXC6P09630 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC27.32■■□□□ 1.96
HOXC6P09630 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.32■■□□□ 1.96
HOXC6P09630 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
HOXC6P09630 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.31■■□□□ 1.96
HOXC6P09630 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
HOXC6P09630 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
HOXC6P09630 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
HOXC6P09630 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC27.3■■□□□ 1.96
HOXC6P09630 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
HOXC6P09630 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
HOXC6P09630 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
HOXC6P09630 MIR4281-201ENST00000580852 62 ntBASIC27.29■■□□□ 1.96
HOXC6P09630 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
HOXC6P09630 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
HOXC6P09630 AC142472.1-201ENST00000612013 1741 ntBASIC27.29■■□□□ 1.96
HOXC6P09630 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
HOXC6P09630 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
HOXC6P09630 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
HOXC6P09630 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
HOXC6P09630 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
HOXC6P09630 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
HOXC6P09630 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
HOXC6P09630 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
HOXC6P09630 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.28■■□□□ 1.96
HOXC6P09630 AC131281.2-201ENST00000520478 145 ntBASIC27.28■■□□□ 1.96
HOXC6P09630 AL139246.5-201ENST00000606645 996 ntBASIC27.28■■□□□ 1.96
HOXC6P09630 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
HOXC6P09630 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.27■■□□□ 1.96
HOXC6P09630 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.96
HOXC6P09630 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.96
HOXC6P09630 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.95
HOXC6P09630 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HOXC6P09630 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.26■■□□□ 1.95
HOXC6P09630 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.26■■□□□ 1.95
HOXC6P09630 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.26■■□□□ 1.95
HOXC6P09630 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HOXC6P09630 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HOXC6P09630 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC27.25■■□□□ 1.95
HOXC6P09630 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
HOXC6P09630 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
HOXC6P09630 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.25■■□□□ 1.95
HOXC6P09630 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
HOXC6P09630 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
HOXC6P09630 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.24■■□□□ 1.95
HOXC6P09630 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.24■■□□□ 1.95
HOXC6P09630 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.24■■□□□ 1.95
HOXC6P09630 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC27.24■■□□□ 1.95
HOXC6P09630 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
HOXC6P09630 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.24■■□□□ 1.95
HOXC6P09630 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
HOXC6P09630 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
HOXC6P09630 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
HOXC6P09630 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.23■■□□□ 1.95
HOXC6P09630 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
HOXC6P09630 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
HOXC6P09630 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.22■■□□□ 1.95
HOXC6P09630 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.22■■□□□ 1.95
HOXC6P09630 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.22■■□□□ 1.95
HOXC6P09630 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
HOXC6P09630 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
HOXC6P09630 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
HOXC6P09630 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
HOXC6P09630 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.21■■□□□ 1.95
HOXC6P09630 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.95
HOXC6P09630 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
HOXC6P09630 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
HOXC6P09630 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
HOXC6P09630 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.2■■□□□ 1.94
HOXC6P09630 NALT1-201ENST00000429224 738 ntTSL 5 BASIC27.2■■□□□ 1.94
HOXC6P09630 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC27.2■■□□□ 1.94
HOXC6P09630 MIR3621-201ENST00000580529 85 ntBASIC27.2■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms