Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.73■□□□□ 0.59
TRGV3P03979 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRGV3P03979 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV3P03979 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
TRGV3P03979 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV3P03979 DUX4L9-201ENST00000449051 1259 ntBASIC18.72■□□□□ 0.59
TRGV3P03979 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV3P03979 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRGV3P03979 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV3P03979 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV3P03979 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV3P03979 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV3P03979 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.71■□□□□ 0.59
TRGV3P03979 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV3P03979 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRGV3P03979 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.71■□□□□ 0.59
TRGV3P03979 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV3P03979 KRT18P10-201ENST00000388836 1287 ntBASIC18.71■□□□□ 0.59
TRGV3P03979 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV3P03979 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV3P03979 MIR6765-201ENST00000614092 87 ntBASIC18.71■□□□□ 0.59
TRGV3P03979 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV3P03979 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV3P03979 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV3P03979 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TRGV3P03979 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
TRGV3P03979 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV3P03979 SPCS2P3-201ENST00000500401 656 ntBASIC18.7■□□□□ 0.58
TRGV3P03979 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
TRGV3P03979 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.7■□□□□ 0.58
TRGV3P03979 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV3P03979 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.7■□□□□ 0.58
TRGV3P03979 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRGV3P03979 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRGV3P03979 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.69■□□□□ 0.58
TRGV3P03979 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRGV3P03979 AC096887.2-201ENST00000623443 1957 ntBASIC18.68■□□□□ 0.58
TRGV3P03979 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.68■□□□□ 0.58
TRGV3P03979 AC012354.3-201ENST00000623734 483 ntBASIC18.68■□□□□ 0.58
TRGV3P03979 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TRGV3P03979 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRGV3P03979 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRGV3P03979 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV3P03979 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV3P03979 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV3P03979 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV3P03979 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV3P03979 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV3P03979 DUX4L18-201ENST00000553347 1267 ntBASIC18.67■□□□□ 0.58
TRGV3P03979 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRGV3P03979 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRGV3P03979 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV3P03979 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV3P03979 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV3P03979 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV3P03979 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.67■□□□□ 0.58
TRGV3P03979 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV3P03979 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.66■□□□□ 0.58
TRGV3P03979 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV3P03979 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.66■□□□□ 0.58
TRGV3P03979 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.66■□□□□ 0.58
TRGV3P03979 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.66■□□□□ 0.58
TRGV3P03979 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRGV3P03979 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRGV3P03979 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRGV3P03979 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.65■□□□□ 0.58
TRGV3P03979 AC004987.1-201ENST00000428627 508 ntBASIC18.65■□□□□ 0.58
TRGV3P03979 ATP5G2P3-201ENST00000429083 425 ntBASIC18.65■□□□□ 0.58
TRGV3P03979 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRGV3P03979 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
TRGV3P03979 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.65■□□□□ 0.58
TRGV3P03979 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.64■□□□□ 0.57
TRGV3P03979 TSPY13P-201ENST00000338964 914 ntBASIC18.64■□□□□ 0.57
TRGV3P03979 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.64■□□□□ 0.57
TRGV3P03979 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRGV3P03979 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRGV3P03979 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.63■□□□□ 0.57
TRGV3P03979 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRGV3P03979 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.63■□□□□ 0.57
TRGV3P03979 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRGV3P03979 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRGV3P03979 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TRGV3P03979 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRGV3P03979 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRGV3P03979 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRGV3P03979 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRGV3P03979 AC139795.1-202ENST00000500444 432 ntBASIC18.62■□□□□ 0.57
TRGV3P03979 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.62■□□□□ 0.57
TRGV3P03979 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRGV3P03979 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRGV3P03979 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRGV3P03979 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRGV3P03979 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV3P03979 AC097639.1-201ENST00000565519 1891 ntBASIC18.61■□□□□ 0.57
TRGV3P03979 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV3P03979 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV3P03979 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV3P03979 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV3P03979 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
TRGV3P03979 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms