Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQA2P01906 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.31■■□□□ 1
HLA-DQA2P01906 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQA2P01906 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
HLA-DQA2P01906 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HLA-DQA2P01906 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.3■■□□□ 1
HLA-DQA2P01906 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.3■■□□□ 1
HLA-DQA2P01906 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HLA-DQA2P01906 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.3■■□□□ 1
HLA-DQA2P01906 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HLA-DQA2P01906 MIR639-201ENST00000384974 98 ntBASIC21.29■■□□□ 1
HLA-DQA2P01906 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.29■■□□□ 1
HLA-DQA2P01906 AC060814.1-201ENST00000554326 538 ntBASIC21.29■■□□□ 1
HLA-DQA2P01906 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
HLA-DQA2P01906 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.29■■□□□ 1
HLA-DQA2P01906 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.29■■□□□ 1
HLA-DQA2P01906 AC022211.4-201ENST00000625094 2161 ntBASIC21.29■■□□□ 1
HLA-DQA2P01906 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HLA-DQA2P01906 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DQA2P01906 AC142381.3-201ENST00000568208 1670 ntBASIC21.28■■□□□ 1
HLA-DQA2P01906 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DQA2P01906 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.28■■□□□ 1
HLA-DQA2P01906 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DQA2P01906 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DQA2P01906 AL157400.5-201ENST00000507624 621 ntBASIC21.27■■□□□ 1
HLA-DQA2P01906 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.27■■□□□ 1
HLA-DQA2P01906 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.27■■□□□ 1
HLA-DQA2P01906 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DQA2P01906 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.27■■□□□ 1
HLA-DQA2P01906 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
HLA-DQA2P01906 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HLA-DQA2P01906 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA2P01906 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.26■□□□□ 0.99
HLA-DQA2P01906 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA2P01906 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA2P01906 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA2P01906 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA2P01906 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA2P01906 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA2P01906 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA2P01906 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA2P01906 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA2P01906 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DQA2P01906 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.25■□□□□ 0.99
HLA-DQA2P01906 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DQA2P01906 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DQA2P01906 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DQA2P01906 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DQA2P01906 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DQA2P01906 SMPD5-203ENST00000639008 1464 ntBASIC21.25■□□□□ 0.99
HLA-DQA2P01906 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DQA2P01906 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
HLA-DQA2P01906 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQA2P01906 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQA2P01906 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.24■□□□□ 0.99
HLA-DQA2P01906 MIR3960-201ENST00000583311 91 ntBASIC21.24■□□□□ 0.99
HLA-DQA2P01906 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQA2P01906 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.24■□□□□ 0.99
HLA-DQA2P01906 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQA2P01906 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DQA2P01906 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DQA2P01906 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
HLA-DQA2P01906 AC022413.1-201ENST00000624602 984 ntBASIC21.23■□□□□ 0.99
HLA-DQA2P01906 AC097639.1-201ENST00000565519 1891 ntBASIC21.23■□□□□ 0.99
HLA-DQA2P01906 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.23■□□□□ 0.99
HLA-DQA2P01906 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DQA2P01906 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQA2P01906 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQA2P01906 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.22■□□□□ 0.99
HLA-DQA2P01906 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HLA-DQA2P01906 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.22■□□□□ 0.99
HLA-DQA2P01906 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.21■□□□□ 0.99
HLA-DQA2P01906 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQA2P01906 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
HLA-DQA2P01906 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQA2P01906 AC025884.2-201ENST00000553429 711 ntBASIC21.21■□□□□ 0.99
HLA-DQA2P01906 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.21■□□□□ 0.99
HLA-DQA2P01906 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.21■□□□□ 0.99
HLA-DQA2P01906 AC138932.3-201ENST00000567634 1902 ntBASIC21.21■□□□□ 0.99
HLA-DQA2P01906 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQA2P01906 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
HLA-DQA2P01906 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
HLA-DQA2P01906 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DQA2P01906 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.2■□□□□ 0.98
HLA-DQA2P01906 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.19■□□□□ 0.98
HLA-DQA2P01906 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DQA2P01906 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DQA2P01906 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DQA2P01906 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
HLA-DQA2P01906 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DQA2P01906 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DQA2P01906 AC092296.2-201ENST00000589470 999 ntBASIC21.18■□□□□ 0.98
HLA-DQA2P01906 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DQA2P01906 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DQA2P01906 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DQA2P01906 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HLA-DQA2P01906 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DQA2P01906 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DQA2P01906 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.17■□□□□ 0.98
HLA-DQA2P01906 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms