Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TGFAP01135 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.75■□□□□ 0.75
TGFAP01135 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.75■□□□□ 0.75
TGFAP01135 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TGFAP01135 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TGFAP01135 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.74■□□□□ 0.75
TGFAP01135 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TGFAP01135 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.74■□□□□ 0.75
TGFAP01135 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TGFAP01135 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
TGFAP01135 AC142472.1-201ENST00000612013 1741 ntBASIC19.73■□□□□ 0.75
TGFAP01135 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TGFAP01135 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TGFAP01135 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
TGFAP01135 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.73■□□□□ 0.75
TGFAP01135 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.73■□□□□ 0.75
TGFAP01135 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.73■□□□□ 0.75
TGFAP01135 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TGFAP01135 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TGFAP01135 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TGFAP01135 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.73■□□□□ 0.75
TGFAP01135 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.73■□□□□ 0.75
TGFAP01135 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TGFAP01135 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TGFAP01135 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TGFAP01135 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
TGFAP01135 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TGFAP01135 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.72■□□□□ 0.75
TGFAP01135 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.71■□□□□ 0.75
TGFAP01135 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TGFAP01135 AC021242.3-201ENST00000607598 1377 ntBASIC19.71■□□□□ 0.75
TGFAP01135 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TGFAP01135 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TGFAP01135 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.71■□□□□ 0.75
TGFAP01135 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.7■□□□□ 0.74
TGFAP01135 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.7■□□□□ 0.74
TGFAP01135 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.7■□□□□ 0.74
TGFAP01135 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.7■□□□□ 0.74
TGFAP01135 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TGFAP01135 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TGFAP01135 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TGFAP01135 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.69■□□□□ 0.74
TGFAP01135 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TGFAP01135 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.69■□□□□ 0.74
TGFAP01135 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TGFAP01135 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.69■□□□□ 0.74
TGFAP01135 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TGFAP01135 AP004609.3-201ENST00000610705 1884 ntBASIC19.69■□□□□ 0.74
TGFAP01135 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TGFAP01135 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TGFAP01135 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TGFAP01135 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.68■□□□□ 0.74
TGFAP01135 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.68■□□□□ 0.74
TGFAP01135 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TGFAP01135 AC092028.1-203ENST00000608262 953 ntBASIC19.68■□□□□ 0.74
TGFAP01135 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.68■□□□□ 0.74
TGFAP01135 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.68■□□□□ 0.74
TGFAP01135 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TGFAP01135 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.68■□□□□ 0.74
TGFAP01135 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TGFAP01135 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TGFAP01135 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TGFAP01135 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.67■□□□□ 0.74
TGFAP01135 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TGFAP01135 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.67■□□□□ 0.74
TGFAP01135 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TGFAP01135 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TGFAP01135 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TGFAP01135 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TGFAP01135 MIR935-201ENST00000401179 91 ntBASIC19.66■□□□□ 0.74
TGFAP01135 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.66■□□□□ 0.74
TGFAP01135 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TGFAP01135 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TGFAP01135 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.65■□□□□ 0.74
TGFAP01135 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.65■□□□□ 0.74
TGFAP01135 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TGFAP01135 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TGFAP01135 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TGFAP01135 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TGFAP01135 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.64■□□□□ 0.73
TGFAP01135 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TGFAP01135 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.64■□□□□ 0.73
TGFAP01135 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TGFAP01135 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TGFAP01135 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TGFAP01135 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TGFAP01135 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.63■□□□□ 0.73
TGFAP01135 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TGFAP01135 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.63■□□□□ 0.73
TGFAP01135 MIR4281-201ENST00000580852 62 ntBASIC19.63■□□□□ 0.73
TGFAP01135 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
TGFAP01135 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.63■□□□□ 0.73
TGFAP01135 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TGFAP01135 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.62■□□□□ 0.73
TGFAP01135 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TGFAP01135 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TGFAP01135 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.62■□□□□ 0.73
TGFAP01135 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TGFAP01135 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TGFAP01135 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms