Protein–RNA interactions for Protein: O75679

RFPL3, Ret finger protein-like 3, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3O75679 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.34■■□□□ 1.33
RFPL3O75679 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFPL3O75679 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RFPL3O75679 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.34■■□□□ 1.33
RFPL3O75679 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RFPL3O75679 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RFPL3O75679 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.33■■□□□ 1.33
RFPL3O75679 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.33■■□□□ 1.33
RFPL3O75679 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
RFPL3O75679 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RFPL3O75679 TSPY9P-201ENST00000440215 945 ntBASIC23.32■■□□□ 1.32
RFPL3O75679 TSPY11P-201ENST00000442607 1045 ntBASIC23.32■■□□□ 1.32
RFPL3O75679 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
RFPL3O75679 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RFPL3O75679 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RFPL3O75679 AC137630.3-201ENST00000607245 391 ntBASIC23.31■■□□□ 1.32
RFPL3O75679 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.31■■□□□ 1.32
RFPL3O75679 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RFPL3O75679 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
RFPL3O75679 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFPL3O75679 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.3■■□□□ 1.32
RFPL3O75679 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RFPL3O75679 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RFPL3O75679 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
RFPL3O75679 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
RFPL3O75679 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RFPL3O75679 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFPL3O75679 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.28■■□□□ 1.32
RFPL3O75679 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RFPL3O75679 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RFPL3O75679 AC021242.3-201ENST00000607598 1377 ntBASIC23.27■■□□□ 1.32
RFPL3O75679 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.27■■□□□ 1.32
RFPL3O75679 MIR638-201ENST00000385237 100 ntBASIC23.27■■□□□ 1.32
RFPL3O75679 AC135731.1-201ENST00000569415 2548 ntBASIC23.27■■□□□ 1.32
RFPL3O75679 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFPL3O75679 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
RFPL3O75679 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFPL3O75679 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
RFPL3O75679 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.26■■□□□ 1.31
RFPL3O75679 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFPL3O75679 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.26■■□□□ 1.31
RFPL3O75679 AC120024.1-201ENST00000562672 995 ntBASIC23.26■■□□□ 1.31
RFPL3O75679 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
RFPL3O75679 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.25■■□□□ 1.31
RFPL3O75679 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.25■■□□□ 1.31
RFPL3O75679 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.25■■□□□ 1.31
RFPL3O75679 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFPL3O75679 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFPL3O75679 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFPL3O75679 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.24■■□□□ 1.31
RFPL3O75679 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFPL3O75679 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
RFPL3O75679 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFPL3O75679 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.23■■□□□ 1.31
RFPL3O75679 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
RFPL3O75679 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFPL3O75679 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.23■■□□□ 1.31
RFPL3O75679 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFPL3O75679 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RFPL3O75679 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.22■■□□□ 1.31
RFPL3O75679 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.22■■□□□ 1.31
RFPL3O75679 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.22■■□□□ 1.31
RFPL3O75679 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.22■■□□□ 1.31
RFPL3O75679 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.22■■□□□ 1.31
RFPL3O75679 AL139246.5-201ENST00000606645 996 ntBASIC23.22■■□□□ 1.31
RFPL3O75679 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.22■■□□□ 1.31
RFPL3O75679 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.22■■□□□ 1.31
RFPL3O75679 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RFPL3O75679 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFPL3O75679 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
RFPL3O75679 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFPL3O75679 AL449106.1-201ENST00000608517 1980 ntBASIC23.21■■□□□ 1.31
RFPL3O75679 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.21■■□□□ 1.31
RFPL3O75679 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFPL3O75679 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFPL3O75679 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RFPL3O75679 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFPL3O75679 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFPL3O75679 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFPL3O75679 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RFPL3O75679 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFPL3O75679 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFPL3O75679 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.2■■□□□ 1.3
RFPL3O75679 AC092028.1-203ENST00000608262 953 ntBASIC23.2■■□□□ 1.3
RFPL3O75679 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFPL3O75679 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RFPL3O75679 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.19■■□□□ 1.3
RFPL3O75679 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFPL3O75679 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RFPL3O75679 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RFPL3O75679 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
RFPL3O75679 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RFPL3O75679 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.18■■□□□ 1.3
RFPL3O75679 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFPL3O75679 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.18■■□□□ 1.3
RFPL3O75679 AC131281.2-201ENST00000520478 145 ntBASIC23.18■■□□□ 1.3
RFPL3O75679 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.18■■□□□ 1.3
RFPL3O75679 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
RFPL3O75679 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
RFPL3O75679 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms