Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA12O60330 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA12O60330 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHGA12O60330 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA12O60330 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA12O60330 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA12O60330 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PCDHGA12O60330 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA12O60330 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.7■■□□□ 1.38
PCDHGA12O60330 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA12O60330 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
PCDHGA12O60330 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
PCDHGA12O60330 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDHGA12O60330 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.69■■□□□ 1.38
PCDHGA12O60330 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA12O60330 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
PCDHGA12O60330 AC135731.1-201ENST00000569415 2548 ntBASIC23.69■■□□□ 1.38
PCDHGA12O60330 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PCDHGA12O60330 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PCDHGA12O60330 BX664725.1-201ENST00000438252 379 ntBASIC23.69■■□□□ 1.38
PCDHGA12O60330 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
PCDHGA12O60330 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA12O60330 AC008406.3-201ENST00000620001 1374 ntBASIC23.68■■□□□ 1.38
PCDHGA12O60330 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA12O60330 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA12O60330 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHGA12O60330 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PCDHGA12O60330 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
PCDHGA12O60330 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHGA12O60330 MIR4787-201ENST00000607364 84 ntBASIC23.67■■□□□ 1.38
PCDHGA12O60330 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA12O60330 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA12O60330 KRT18P24-201ENST00000344739 1156 ntBASIC23.66■■□□□ 1.38
PCDHGA12O60330 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PCDHGA12O60330 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA12O60330 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHGA12O60330 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.66■■□□□ 1.38
PCDHGA12O60330 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHGA12O60330 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHGA12O60330 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA12O60330 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
PCDHGA12O60330 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGA12O60330 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA12O60330 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.65■■□□□ 1.38
PCDHGA12O60330 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA12O60330 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.65■■□□□ 1.38
PCDHGA12O60330 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA12O60330 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHGA12O60330 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
PCDHGA12O60330 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHGA12O60330 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGA12O60330 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
PCDHGA12O60330 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGA12O60330 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGA12O60330 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
PCDHGA12O60330 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
PCDHGA12O60330 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.63■■□□□ 1.37
PCDHGA12O60330 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.63■■□□□ 1.37
PCDHGA12O60330 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA12O60330 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA12O60330 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA12O60330 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGA12O60330 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGA12O60330 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
PCDHGA12O60330 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHGA12O60330 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGA12O60330 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGA12O60330 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGA12O60330 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHGA12O60330 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PCDHGA12O60330 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDHGA12O60330 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA12O60330 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA12O60330 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA12O60330 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA12O60330 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA12O60330 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHGA12O60330 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
PCDHGA12O60330 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDHGA12O60330 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA12O60330 BX255925.1-201ENST00000566954 1854 ntBASIC23.6■■□□□ 1.37
PCDHGA12O60330 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA12O60330 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA12O60330 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHGA12O60330 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA12O60330 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDHGA12O60330 UNC93B8-201ENST00000511903 705 ntBASIC23.59■■□□□ 1.37
PCDHGA12O60330 AC137630.3-201ENST00000607245 391 ntBASIC23.59■■□□□ 1.37
PCDHGA12O60330 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA12O60330 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA12O60330 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGA12O60330 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHGA12O60330 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHGA12O60330 AL449106.1-201ENST00000608517 1980 ntBASIC23.58■■□□□ 1.36
PCDHGA12O60330 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGA12O60330 KRT16P3-201ENST00000439127 1283 ntBASIC23.57■■□□□ 1.36
PCDHGA12O60330 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGA12O60330 LINC01003-201ENST00000564834 1764 ntBASIC23.57■■□□□ 1.36
PCDHGA12O60330 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA12O60330 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms