Protein–RNA interactions for Protein: O15498

YKT6, Synaptobrevin homolog YKT6, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YKT6O15498 AC092028.1-203ENST00000608262 953 ntBASIC23.41■■□□□ 1.34
YKT6O15498 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.41■■□□□ 1.34
YKT6O15498 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
YKT6O15498 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
YKT6O15498 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.4■■□□□ 1.34
YKT6O15498 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
YKT6O15498 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
YKT6O15498 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
YKT6O15498 MIR4281-201ENST00000580852 62 ntBASIC23.39■■□□□ 1.33
YKT6O15498 AC011551.1-201ENST00000614101 683 ntBASIC23.39■■□□□ 1.33
YKT6O15498 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
YKT6O15498 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
YKT6O15498 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
YKT6O15498 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
YKT6O15498 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
YKT6O15498 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.38■■□□□ 1.33
YKT6O15498 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.38■■□□□ 1.33
YKT6O15498 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
YKT6O15498 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
YKT6O15498 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
YKT6O15498 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.37■■□□□ 1.33
YKT6O15498 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
YKT6O15498 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
YKT6O15498 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.37■■□□□ 1.33
YKT6O15498 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.36■■□□□ 1.33
YKT6O15498 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
YKT6O15498 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.36■■□□□ 1.33
YKT6O15498 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.36■■□□□ 1.33
YKT6O15498 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
YKT6O15498 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
YKT6O15498 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.35■■□□□ 1.33
YKT6O15498 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.35■■□□□ 1.33
YKT6O15498 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
YKT6O15498 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.35■■□□□ 1.33
YKT6O15498 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
YKT6O15498 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.34■■□□□ 1.33
YKT6O15498 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
YKT6O15498 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.34■■□□□ 1.33
YKT6O15498 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
YKT6O15498 AP004609.3-201ENST00000610705 1884 ntBASIC23.33■■□□□ 1.33
YKT6O15498 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
YKT6O15498 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.33■■□□□ 1.33
YKT6O15498 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
YKT6O15498 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
YKT6O15498 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
YKT6O15498 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.32■■□□□ 1.32
YKT6O15498 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
YKT6O15498 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
YKT6O15498 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
YKT6O15498 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
YKT6O15498 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.31■■□□□ 1.32
YKT6O15498 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
YKT6O15498 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
YKT6O15498 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
YKT6O15498 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
YKT6O15498 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.31■■□□□ 1.32
YKT6O15498 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.31■■□□□ 1.32
YKT6O15498 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
YKT6O15498 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
YKT6O15498 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
YKT6O15498 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
YKT6O15498 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.3■■□□□ 1.32
YKT6O15498 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.3■■□□□ 1.32
YKT6O15498 MTDHP2-201ENST00000601468 714 ntBASIC23.3■■□□□ 1.32
YKT6O15498 AC010997.5-201ENST00000609182 354 ntBASIC23.3■■□□□ 1.32
YKT6O15498 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
YKT6O15498 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
YKT6O15498 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
YKT6O15498 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
YKT6O15498 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
YKT6O15498 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.29■■□□□ 1.32
YKT6O15498 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
YKT6O15498 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
YKT6O15498 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.28■■□□□ 1.32
YKT6O15498 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.28■■□□□ 1.32
YKT6O15498 MIR6724-1-201ENST00000616420 92 ntBASIC23.28■■□□□ 1.32
YKT6O15498 MIR6724-2-201ENST00000616483 92 ntBASIC23.28■■□□□ 1.32
YKT6O15498 MIR6724-4-201ENST00000617390 92 ntBASIC23.28■■□□□ 1.32
YKT6O15498 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.28■■□□□ 1.32
YKT6O15498 MIR6724-3-201ENST00000622482 92 ntBASIC23.28■■□□□ 1.32
YKT6O15498 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.28■■□□□ 1.32
YKT6O15498 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
YKT6O15498 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
YKT6O15498 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
YKT6O15498 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
YKT6O15498 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.27■■□□□ 1.32
YKT6O15498 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
YKT6O15498 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
YKT6O15498 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
YKT6O15498 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.26■■□□□ 1.31
YKT6O15498 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.26■■□□□ 1.31
YKT6O15498 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
YKT6O15498 AC131281.2-201ENST00000520478 145 ntBASIC23.26■■□□□ 1.31
YKT6O15498 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.26■■□□□ 1.31
YKT6O15498 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.26■■□□□ 1.31
YKT6O15498 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.26■■□□□ 1.31
YKT6O15498 AL139246.5-201ENST00000606645 996 ntBASIC23.26■■□□□ 1.31
YKT6O15498 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.26■■□□□ 1.31
YKT6O15498 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
YKT6O15498 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms