Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC39.84■■■■□ 3.97
CHD1O14646 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC39.83■■■■□ 3.97
CHD1O14646 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC39.83■■■■□ 3.97
CHD1O14646 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.97
CHD1O14646 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC39.83■■■■□ 3.97
CHD1O14646 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC39.83■■■■□ 3.97
CHD1O14646 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.97
CHD1O14646 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC39.83■■■■□ 3.97
CHD1O14646 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC39.82■■■■□ 3.97
CHD1O14646 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC39.82■■■■□ 3.97
CHD1O14646 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC39.82■■■■□ 3.97
CHD1O14646 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC39.82■■■■□ 3.97
CHD1O14646 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.96
CHD1O14646 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC39.82■■■■□ 3.96
CHD1O14646 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC39.82■■■■□ 3.96
CHD1O14646 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC39.82■■■■□ 3.96
CHD1O14646 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
CHD1O14646 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC39.81■■■■□ 3.96
CHD1O14646 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC39.81■■■■□ 3.96
CHD1O14646 ABCB10P3-201ENST00000561950 2166 ntBASIC39.81■■■■□ 3.96
CHD1O14646 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC39.8■■■■□ 3.96
CHD1O14646 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC39.8■■■■□ 3.96
CHD1O14646 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
CHD1O14646 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
CHD1O14646 CD72-202ENST00000378430 585 ntTSL 3 BASIC39.8■■■■□ 3.96
CHD1O14646 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC39.8■■■■□ 3.96
CHD1O14646 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
CHD1O14646 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC39.79■■■■□ 3.96
CHD1O14646 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC39.79■■■■□ 3.96
CHD1O14646 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC39.79■■■■□ 3.96
CHD1O14646 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
CHD1O14646 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC39.77■■■■□ 3.96
CHD1O14646 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC39.76■■■■□ 3.96
CHD1O14646 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
CHD1O14646 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC39.76■■■■□ 3.96
CHD1O14646 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC39.76■■■■□ 3.96
CHD1O14646 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC39.76■■■■□ 3.96
CHD1O14646 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC39.75■■■■□ 3.95
CHD1O14646 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC39.75■■■■□ 3.95
CHD1O14646 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC39.75■■■■□ 3.95
CHD1O14646 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC39.75■■■■□ 3.95
CHD1O14646 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC39.74■■■■□ 3.95
CHD1O14646 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC39.74■■■■□ 3.95
CHD1O14646 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC39.74■■■■□ 3.95
CHD1O14646 MIR6821-201ENST00000617625 74 ntBASIC39.74■■■■□ 3.95
CHD1O14646 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC39.73■■■■□ 3.95
CHD1O14646 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC39.72■■■■□ 3.95
CHD1O14646 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC39.72■■■■□ 3.95
CHD1O14646 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC39.72■■■■□ 3.95
CHD1O14646 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC39.71■■■■□ 3.95
CHD1O14646 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
CHD1O14646 PARL-206ENST00000435888 1098 ntTSL 5 BASIC39.71■■■■□ 3.95
CHD1O14646 AL162430.1-201ENST00000480705 870 ntBASIC39.71■■■■□ 3.95
CHD1O14646 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC39.7■■■■□ 3.95
CHD1O14646 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC39.7■■■■□ 3.95
CHD1O14646 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC39.7■■■■□ 3.95
CHD1O14646 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC39.7■■■■□ 3.95
CHD1O14646 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC39.69■■■■□ 3.94
CHD1O14646 TFPT-201ENST00000391757 774 ntTSL 5 BASIC39.69■■■■□ 3.94
CHD1O14646 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC39.69■■■■□ 3.94
CHD1O14646 AL136162.1-201ENST00000607711 1078 ntBASIC39.69■■■■□ 3.94
CHD1O14646 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC39.69■■■■□ 3.94
CHD1O14646 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC39.69■■■■□ 3.94
CHD1O14646 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC39.69■■■■□ 3.94
CHD1O14646 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC39.68■■■■□ 3.94
CHD1O14646 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC39.68■■■■□ 3.94
CHD1O14646 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC39.68■■■■□ 3.94
CHD1O14646 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC39.67■■■■□ 3.94
CHD1O14646 UNC93B3-201ENST00000308076 687 ntBASIC39.67■■■■□ 3.94
CHD1O14646 AC011551.1-201ENST00000614101 683 ntBASIC39.67■■■■□ 3.94
CHD1O14646 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
CHD1O14646 AC097381.1-201ENST00000429019 1296 ntBASIC39.66■■■■□ 3.94
CHD1O14646 AC087623.3-201ENST00000607047 1098 ntBASIC39.66■■■■□ 3.94
CHD1O14646 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
CHD1O14646 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC39.65■■■■□ 3.94
CHD1O14646 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC39.65■■■■□ 3.94
CHD1O14646 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC39.65■■■■□ 3.94
CHD1O14646 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
CHD1O14646 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
CHD1O14646 EDA-201ENST00000338901 1233 ntBASIC39.64■■■■□ 3.94
CHD1O14646 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
CHD1O14646 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
CHD1O14646 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
CHD1O14646 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC39.63■■■■□ 3.94
CHD1O14646 AC090192.1-201ENST00000517740 490 ntBASIC39.63■■■■□ 3.94
CHD1O14646 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC39.63■■■■□ 3.93
CHD1O14646 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC39.62■■■■□ 3.93
CHD1O14646 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC39.62■■■■□ 3.93
CHD1O14646 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
CHD1O14646 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC39.61■■■■□ 3.93
CHD1O14646 AC024257.2-201ENST00000549699 147 ntBASIC39.61■■■■□ 3.93
CHD1O14646 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC39.61■■■■□ 3.93
CHD1O14646 PLD4-205ENST00000553861 667 ntTSL 2 BASIC39.6■■■■□ 3.93
CHD1O14646 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC39.59■■■■□ 3.93
CHD1O14646 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
CHD1O14646 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC39.59■■■■□ 3.93
CHD1O14646 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC39.59■■■■□ 3.93
CHD1O14646 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC39.58■■■■□ 3.93
CHD1O14646 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC39.58■■■■□ 3.93
CHD1O14646 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
Retrieved 100 of 98,524 protein–RNA pairs in 355.2 ms