Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.74■■□□□ 1.07
NPIPA2E9PIF3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPIPA2E9PIF3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.74■■□□□ 1.07
NPIPA2E9PIF3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NPIPA2E9PIF3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPIPA2E9PIF3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NPIPA2E9PIF3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPIPA2E9PIF3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPIPA2E9PIF3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NPIPA2E9PIF3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.73■■□□□ 1.07
NPIPA2E9PIF3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPIPA2E9PIF3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPIPA2E9PIF3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.73■■□□□ 1.07
NPIPA2E9PIF3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPIPA2E9PIF3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPIPA2E9PIF3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPIPA2E9PIF3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
NPIPA2E9PIF3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPIPA2E9PIF3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NPIPA2E9PIF3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NPIPA2E9PIF3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPIPA2E9PIF3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.72■■□□□ 1.07
NPIPA2E9PIF3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPIPA2E9PIF3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPIPA2E9PIF3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.71■■□□□ 1.07
NPIPA2E9PIF3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPIPA2E9PIF3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NPIPA2E9PIF3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NPIPA2E9PIF3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NPIPA2E9PIF3 AC103724.3-201ENST00000564481 992 ntBASIC21.71■■□□□ 1.07
NPIPA2E9PIF3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NPIPA2E9PIF3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPA2E9PIF3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPA2E9PIF3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPA2E9PIF3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPA2E9PIF3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPA2E9PIF3 AC019171.1-201ENST00000601251 1056 ntBASIC21.7■■□□□ 1.06
NPIPA2E9PIF3 AL031848.2-201ENST00000607670 837 ntBASIC21.7■■□□□ 1.06
NPIPA2E9PIF3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPA2E9PIF3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPA2E9PIF3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPA2E9PIF3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.7■■□□□ 1.06
NPIPA2E9PIF3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPA2E9PIF3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPA2E9PIF3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPA2E9PIF3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NPIPA2E9PIF3 LONRF2P2-201ENST00000439212 571 ntBASIC21.69■■□□□ 1.06
NPIPA2E9PIF3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPA2E9PIF3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPA2E9PIF3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.68■■□□□ 1.06
NPIPA2E9PIF3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPA2E9PIF3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
NPIPA2E9PIF3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.68■■□□□ 1.06
NPIPA2E9PIF3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPA2E9PIF3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPA2E9PIF3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPA2E9PIF3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPA2E9PIF3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.68■■□□□ 1.06
NPIPA2E9PIF3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPIPA2E9PIF3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.67■■□□□ 1.06
NPIPA2E9PIF3 KRT18P10-201ENST00000388836 1287 ntBASIC21.67■■□□□ 1.06
NPIPA2E9PIF3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.67■■□□□ 1.06
NPIPA2E9PIF3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPIPA2E9PIF3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NPIPA2E9PIF3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
NPIPA2E9PIF3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.67■■□□□ 1.06
NPIPA2E9PIF3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPA2E9PIF3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPA2E9PIF3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.66■■□□□ 1.06
NPIPA2E9PIF3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.66■■□□□ 1.06
NPIPA2E9PIF3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NPIPA2E9PIF3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.66■■□□□ 1.06
NPIPA2E9PIF3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPA2E9PIF3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPA2E9PIF3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPA2E9PIF3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.65■■□□□ 1.06
NPIPA2E9PIF3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.65■■□□□ 1.06
NPIPA2E9PIF3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPA2E9PIF3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.65■■□□□ 1.06
NPIPA2E9PIF3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NPIPA2E9PIF3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.64■■□□□ 1.05
NPIPA2E9PIF3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPIPA2E9PIF3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NPIPA2E9PIF3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPIPA2E9PIF3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NPIPA2E9PIF3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.64■■□□□ 1.05
NPIPA2E9PIF3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.64■■□□□ 1.05
NPIPA2E9PIF3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPIPA2E9PIF3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPIPA2E9PIF3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NPIPA2E9PIF3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NPIPA2E9PIF3 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.63■■□□□ 1.05
NPIPA2E9PIF3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPIPA2E9PIF3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NPIPA2E9PIF3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.62■■□□□ 1.05
NPIPA2E9PIF3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.62■■□□□ 1.05
NPIPA2E9PIF3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NPIPA2E9PIF3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.62■■□□□ 1.05
NPIPA2E9PIF3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NPIPA2E9PIF3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms