Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.85■□□□□ 0.29
TRAV10A0A0B4J240 Z92544.1-202ENST00000571933 1220 ntBASIC16.85■□□□□ 0.29
TRAV10A0A0B4J240 THA1P-201ENST00000590384 1145 ntBASIC16.85■□□□□ 0.29
TRAV10A0A0B4J240 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRAV10A0A0B4J240 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV10A0A0B4J240 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV10A0A0B4J240 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRAV10A0A0B4J240 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRAV10A0A0B4J240 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV10A0A0B4J240 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV10A0A0B4J240 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV10A0A0B4J240 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV10A0A0B4J240 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV10A0A0B4J240 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
TRAV10A0A0B4J240 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV10A0A0B4J240 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV10A0A0B4J240 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV10A0A0B4J240 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV10A0A0B4J240 GUSBP5-201ENST00000418136 578 ntBASIC16.83■□□□□ 0.28
TRAV10A0A0B4J240 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
TRAV10A0A0B4J240 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV10A0A0B4J240 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV10A0A0B4J240 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV10A0A0B4J240 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV10A0A0B4J240 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV10A0A0B4J240 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV10A0A0B4J240 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV10A0A0B4J240 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
TRAV10A0A0B4J240 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV10A0A0B4J240 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV10A0A0B4J240 KRT18P24-201ENST00000344739 1156 ntBASIC16.82■□□□□ 0.28
TRAV10A0A0B4J240 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV10A0A0B4J240 AL592295.1-201ENST00000400984 884 ntBASIC16.82■□□□□ 0.28
TRAV10A0A0B4J240 BX664725.1-201ENST00000438252 379 ntBASIC16.82■□□□□ 0.28
TRAV10A0A0B4J240 AC239859.2-201ENST00000444165 318 ntBASIC16.82■□□□□ 0.28
TRAV10A0A0B4J240 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV10A0A0B4J240 KRT125P-201ENST00000546827 989 ntBASIC16.82■□□□□ 0.28
TRAV10A0A0B4J240 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV10A0A0B4J240 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV10A0A0B4J240 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV10A0A0B4J240 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV10A0A0B4J240 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRAV10A0A0B4J240 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV10A0A0B4J240 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV10A0A0B4J240 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV10A0A0B4J240 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV10A0A0B4J240 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV10A0A0B4J240 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV10A0A0B4J240 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRAV10A0A0B4J240 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAV10A0A0B4J240 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAV10A0A0B4J240 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV10A0A0B4J240 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV10A0A0B4J240 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.8■□□□□ 0.28
TRAV10A0A0B4J240 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV10A0A0B4J240 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV10A0A0B4J240 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV10A0A0B4J240 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV10A0A0B4J240 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV10A0A0B4J240 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV10A0A0B4J240 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV10A0A0B4J240 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV10A0A0B4J240 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV10A0A0B4J240 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV10A0A0B4J240 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV10A0A0B4J240 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV10A0A0B4J240 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV10A0A0B4J240 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRAV10A0A0B4J240 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV10A0A0B4J240 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TRAV10A0A0B4J240 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV10A0A0B4J240 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV10A0A0B4J240 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRAV10A0A0B4J240 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV10A0A0B4J240 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV10A0A0B4J240 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV10A0A0B4J240 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV10A0A0B4J240 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TRAV10A0A0B4J240 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV10A0A0B4J240 AC135731.1-201ENST00000569415 2548 ntBASIC16.77■□□□□ 0.28
TRAV10A0A0B4J240 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TRAV10A0A0B4J240 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV10A0A0B4J240 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV10A0A0B4J240 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV10A0A0B4J240 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV10A0A0B4J240 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV10A0A0B4J240 AC120024.1-201ENST00000562672 995 ntBASIC16.76■□□□□ 0.27
TRAV10A0A0B4J240 AC131212.1-201ENST00000613771 668 ntBASIC16.76■□□□□ 0.27
TRAV10A0A0B4J240 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV10A0A0B4J240 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV10A0A0B4J240 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV10A0A0B4J240 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV10A0A0B4J240 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV10A0A0B4J240 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV10A0A0B4J240 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAV10A0A0B4J240 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
TRAV10A0A0B4J240 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAV10A0A0B4J240 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV10A0A0B4J240 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV10A0A0B4J240 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms