Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.17■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.17■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 AC022211.4-201ENST00000625094 2161 ntBASIC21.16■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 HSD17B1P1-201ENST00000590052 955 ntBASIC21.16■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.15■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.15■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.15■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 AC009831.1-201ENST00000580420 1582 ntBASIC21.15■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.15■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.15■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.15■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.14■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.14■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.14■□□□□ 0.98
IGKV1D-43A0A0B4J1Z2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.13■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.12■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 AC138932.3-201ENST00000567634 1902 ntBASIC21.12■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 SLC6A10P-202ENST00000431994 2058 ntBASIC21.11■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 RARRES2P2-201ENST00000394842 485 ntBASIC21.11■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 AC142381.3-201ENST00000568208 1670 ntBASIC21.1■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.1■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 AC133552.2-201ENST00000619106 1032 ntBASIC21.1■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.09■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.08■□□□□ 0.97
IGKV1D-43A0A0B4J1Z2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.05■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IGKV1D-43A0A0B4J1Z2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms