Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
TRGV5A0A0B4J1U4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.55■■□□□ 1.04
TRGV5A0A0B4J1U4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.55■■□□□ 1.04
TRGV5A0A0B4J1U4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV5A0A0B4J1U4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV5A0A0B4J1U4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV5A0A0B4J1U4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRGV5A0A0B4J1U4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TRGV5A0A0B4J1U4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.54■■□□□ 1.04
TRGV5A0A0B4J1U4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRGV5A0A0B4J1U4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRGV5A0A0B4J1U4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRGV5A0A0B4J1U4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.54■■□□□ 1.04
TRGV5A0A0B4J1U4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.54■■□□□ 1.04
TRGV5A0A0B4J1U4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRGV5A0A0B4J1U4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TRGV5A0A0B4J1U4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TRGV5A0A0B4J1U4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRGV5A0A0B4J1U4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TRGV5A0A0B4J1U4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRGV5A0A0B4J1U4 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.53■■□□□ 1.04
TRGV5A0A0B4J1U4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.53■■□□□ 1.04
TRGV5A0A0B4J1U4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRGV5A0A0B4J1U4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRGV5A0A0B4J1U4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRGV5A0A0B4J1U4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRGV5A0A0B4J1U4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TRGV5A0A0B4J1U4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRGV5A0A0B4J1U4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TRGV5A0A0B4J1U4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRGV5A0A0B4J1U4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TRGV5A0A0B4J1U4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRGV5A0A0B4J1U4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
TRGV5A0A0B4J1U4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRGV5A0A0B4J1U4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.52■■□□□ 1.04
TRGV5A0A0B4J1U4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRGV5A0A0B4J1U4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TRGV5A0A0B4J1U4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRGV5A0A0B4J1U4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRGV5A0A0B4J1U4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.52■■□□□ 1.03
TRGV5A0A0B4J1U4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.52■■□□□ 1.03
TRGV5A0A0B4J1U4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRGV5A0A0B4J1U4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.51■■□□□ 1.03
TRGV5A0A0B4J1U4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TRGV5A0A0B4J1U4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TRGV5A0A0B4J1U4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRGV5A0A0B4J1U4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRGV5A0A0B4J1U4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.51■■□□□ 1.03
TRGV5A0A0B4J1U4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRGV5A0A0B4J1U4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
TRGV5A0A0B4J1U4 KRT18P24-201ENST00000344739 1156 ntBASIC21.49■■□□□ 1.03
TRGV5A0A0B4J1U4 AL592295.1-201ENST00000400984 884 ntBASIC21.49■■□□□ 1.03
TRGV5A0A0B4J1U4 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.49■■□□□ 1.03
TRGV5A0A0B4J1U4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TRGV5A0A0B4J1U4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRGV5A0A0B4J1U4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.49■■□□□ 1.03
TRGV5A0A0B4J1U4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.49■■□□□ 1.03
TRGV5A0A0B4J1U4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TRGV5A0A0B4J1U4 THA1P-201ENST00000590384 1145 ntBASIC21.48■■□□□ 1.03
TRGV5A0A0B4J1U4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRGV5A0A0B4J1U4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRGV5A0A0B4J1U4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRGV5A0A0B4J1U4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TRGV5A0A0B4J1U4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.47■■□□□ 1.03
TRGV5A0A0B4J1U4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRGV5A0A0B4J1U4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRGV5A0A0B4J1U4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.47■■□□□ 1.03
TRGV5A0A0B4J1U4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRGV5A0A0B4J1U4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRGV5A0A0B4J1U4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.47■■□□□ 1.03
TRGV5A0A0B4J1U4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRGV5A0A0B4J1U4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TRGV5A0A0B4J1U4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.46■■□□□ 1.03
TRGV5A0A0B4J1U4 GUSBP5-201ENST00000418136 578 ntBASIC21.46■■□□□ 1.03
TRGV5A0A0B4J1U4 AC239859.2-201ENST00000444165 318 ntBASIC21.46■■□□□ 1.03
TRGV5A0A0B4J1U4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.46■■□□□ 1.03
TRGV5A0A0B4J1U4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TRGV5A0A0B4J1U4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRGV5A0A0B4J1U4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.45■■□□□ 1.02
TRGV5A0A0B4J1U4 Z92544.1-202ENST00000571933 1220 ntBASIC21.45■■□□□ 1.02
TRGV5A0A0B4J1U4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TRGV5A0A0B4J1U4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRGV5A0A0B4J1U4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRGV5A0A0B4J1U4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRGV5A0A0B4J1U4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRGV5A0A0B4J1U4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
TRGV5A0A0B4J1U4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.44■■□□□ 1.02
TRGV5A0A0B4J1U4 AC120024.1-201ENST00000562672 995 ntBASIC21.44■■□□□ 1.02
TRGV5A0A0B4J1U4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.44■■□□□ 1.02
TRGV5A0A0B4J1U4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.44■■□□□ 1.02
TRGV5A0A0B4J1U4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRGV5A0A0B4J1U4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
TRGV5A0A0B4J1U4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
TRGV5A0A0B4J1U4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRGV5A0A0B4J1U4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.43■■□□□ 1.02
TRGV5A0A0B4J1U4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.43■■□□□ 1.02
TRGV5A0A0B4J1U4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
TRGV5A0A0B4J1U4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRGV5A0A0B4J1U4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.43■■□□□ 1.02
TRGV5A0A0B4J1U4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms