Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 NFIC-211ENST00000641145 8399 ntBASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 AC010654.1-201ENST00000615722 808 ntBASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 AC097637.2-201ENST00000624096 1997 ntBASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 HCG4B-203ENST00000450128 991 ntBASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 AC010327.4-202ENST00000591484 748 ntBASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 AL691403.2-201ENST00000618460 490 ntBASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB6Q9Y5F9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGB6Q9Y5F9 MRPL20P1-201ENST00000400819 433 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms