Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 AC012313.1-201ENST00000593393 3059 ntBASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.87■□□□□ 0.45
UBQLN1Q9UMX0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 AC105233.2-201ENST00000523697 349 ntBASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 AF228730.5-201ENST00000530288 346 ntBASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 AC073389.1-201ENST00000595595 795 ntBASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 AC093028.1-201ENST00000622998 982 ntBASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBQLN1Q9UMX0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 AL645939.2-201ENST00000427340 991 ntBASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 PRYP6-201ENST00000514804 343 ntBASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 AC109322.1-201ENST00000524499 1264 ntBASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 SLC25A39P2-201ENST00000537614 270 ntBASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 AC025678.2-201ENST00000562061 970 ntBASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 AC020765.3-201ENST00000613051 740 ntBASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBQLN1Q9UMX0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 AL031731.1-201ENST00000642131 2094 ntBASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 GPS2P2-201ENST00000430745 888 ntBASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 RBPMS2P1-201ENST00000437762 623 ntBASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.84■□□□□ 0.45
UBQLN1Q9UMX0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms