Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 AL596087.1-201ENST00000400979 1969 ntBASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 AL671710.1-201ENST00000610245 2349 ntBASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.9□□□□□ -0.34
SHANK2-AS3Q9BTD1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.9□□□□□ -0.35
SHANK2-AS3Q9BTD1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
SHANK2-AS3Q9BTD1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SHANK2-AS3Q9BTD1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
SHANK2-AS3Q9BTD1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
SHANK2-AS3Q9BTD1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 PKD1P5-201ENST00000532415 10291 ntBASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 AL512652.2-201ENST00000625156 1716 ntBASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 RBM17P3-201ENST00000417687 1192 ntBASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 PAWRP1-201ENST00000451083 565 ntBASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 MIR4492-201ENST00000581627 80 ntBASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC138894.3-201ENST00000603787 634 ntBASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC092119.3-201ENST00000612618 583 ntBASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SHANK2-AS3Q9BTD1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 KRT8P39-201ENST00000396270 1433 ntBASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC091167.2-201ENST00000579581 588 ntBASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 NKAPP1-205ENST00000585790 367 ntBASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SHANK2-AS3Q9BTD1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms