Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FGD4Q96M96 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FGD4Q96M96 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.84■□□□□ 0.61
FGD4Q96M96 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FGD4Q96M96 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FGD4Q96M96 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
FGD4Q96M96 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FGD4Q96M96 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
FGD4Q96M96 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD4Q96M96 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD4Q96M96 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FGD4Q96M96 AC005034.1-201ENST00000426657 489 ntBASIC18.83■□□□□ 0.6
FGD4Q96M96 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.83■□□□□ 0.6
FGD4Q96M96 CRB3P1-201ENST00000449338 276 ntBASIC18.83■□□□□ 0.6
FGD4Q96M96 AL512638.1-201ENST00000457493 794 ntBASIC18.83■□□□□ 0.6
FGD4Q96M96 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.83■□□□□ 0.6
FGD4Q96M96 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.83■□□□□ 0.6
FGD4Q96M96 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.83■□□□□ 0.6
FGD4Q96M96 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FGD4Q96M96 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
FGD4Q96M96 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD4Q96M96 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD4Q96M96 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD4Q96M96 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD4Q96M96 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.83■□□□□ 0.6
FGD4Q96M96 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD4Q96M96 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD4Q96M96 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
FGD4Q96M96 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.83■□□□□ 0.6
FGD4Q96M96 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.82■□□□□ 0.6
FGD4Q96M96 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.82■□□□□ 0.6
FGD4Q96M96 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.82■□□□□ 0.6
FGD4Q96M96 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
FGD4Q96M96 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
FGD4Q96M96 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.82■□□□□ 0.6
FGD4Q96M96 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.82■□□□□ 0.6
FGD4Q96M96 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
FGD4Q96M96 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.82■□□□□ 0.6
FGD4Q96M96 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.82■□□□□ 0.6
FGD4Q96M96 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.82■□□□□ 0.6
FGD4Q96M96 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
FGD4Q96M96 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.82■□□□□ 0.6
FGD4Q96M96 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.82■□□□□ 0.6
FGD4Q96M96 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.82■□□□□ 0.6
FGD4Q96M96 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 AC092068.3-201ENST00000587894 2016 ntBASIC18.82■□□□□ 0.6
FGD4Q96M96 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
FGD4Q96M96 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.82■□□□□ 0.6
FGD4Q96M96 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.82■□□□□ 0.6
FGD4Q96M96 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
FGD4Q96M96 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.82■□□□□ 0.6
FGD4Q96M96 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FGD4Q96M96 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.81■□□□□ 0.6
FGD4Q96M96 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.81■□□□□ 0.6
FGD4Q96M96 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FGD4Q96M96 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
FGD4Q96M96 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FGD4Q96M96 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.81■□□□□ 0.6
FGD4Q96M96 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
FGD4Q96M96 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.81■□□□□ 0.6
FGD4Q96M96 TUBB8P12-201ENST00000308911 1335 ntBASIC18.81■□□□□ 0.6
FGD4Q96M96 TUBB7P-202ENST00000428444 1305 ntBASIC18.81■□□□□ 0.6
FGD4Q96M96 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FGD4Q96M96 TUBB8P7-204ENST00000567960 1332 ntBASIC18.81■□□□□ 0.6
FGD4Q96M96 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
FGD4Q96M96 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.81■□□□□ 0.6
FGD4Q96M96 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FGD4Q96M96 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FGD4Q96M96 HLA-H-201ENST00000383620 1096 ntBASIC18.81■□□□□ 0.6
FGD4Q96M96 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.81■□□□□ 0.6
FGD4Q96M96 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
FGD4Q96M96 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
FGD4Q96M96 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.81■□□□□ 0.6
FGD4Q96M96 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FGD4Q96M96 HLA-V-204ENST00000476601 1289 ntBASIC18.81■□□□□ 0.6
FGD4Q96M96 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.81■□□□□ 0.6
FGD4Q96M96 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FGD4Q96M96 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FGD4Q96M96 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FGD4Q96M96 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
FGD4Q96M96 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
FGD4Q96M96 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms