Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SNIP1Q8TAD8 REXO1L11P-201ENST00000620964 1927 ntBASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 CETN4P-206ENST00000642099 2168 ntBASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 MIR658-201ENST00000385210 100 ntBASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 AL353705.2-201ENST00000428243 662 ntBASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 RAB43P1-201ENST00000561790 589 ntBASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 BICD1-207ENST00000551848 1962 ntBASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.72■□□□□ 0.11
SNIP1Q8TAD8 BTBD7P1-201ENST00000447253 1453 ntBASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 HLA-H-201ENST00000383620 1096 ntBASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 AC092658.1-201ENST00000505836 891 ntBASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 KRT17P8-201ENST00000540749 863 ntBASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 FLJ13224-201ENST00000313737 1514 ntBASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNIP1Q8TAD8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SNIP1Q8TAD8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SNIP1Q8TAD8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNIP1Q8TAD8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms