Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 ATP2A1-203ENST00000536376 3130 ntTSL 2 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 CAGE1-206ENST00000502583 3284 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 CAMTA1-210ENST00000476864 714 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 PUM3-202ENST00000397885 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 N4BP2L1-204ENST00000380139 2994 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 AC138904.1-201ENST00000501520 2481 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
SVIPQ8NHG7 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 HM13-204ENST00000398174 3792 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 USF1-203ENST00000368021 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 TAF1C-203ENST00000541676 3502 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 FAM90A17P-201ENST00000533716 1957 ntBASIC10.29□□□□□ -0.76
SVIPQ8NHG7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 XPC-201ENST00000285021 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 AC120057.1-201ENST00000483947 663 ntBASIC10.29□□□□□ -0.76
SVIPQ8NHG7 AP000345.2-201ENST00000608615 1081 ntTSL 3 BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 GUCD1-213ENST00000621833 3584 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 AP004833.2-201ENST00000532228 1454 ntBASIC10.29□□□□□ -0.76
SVIPQ8NHG7 PCDHGB4-202ENST00000615384 4725 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 CNDP2-209ENST00000579847 2653 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SVIPQ8NHG7 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC10.28□□□□□ -0.76
SVIPQ8NHG7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms