RNA–Protein interactions for RNA: ENST00000502583.5

CAGE1-206, Transcript of cancer antigen 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAGE1, Length 3,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-206ENST00000502583 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
CAGE1-206ENST00000502583 SHROOM4Q9ULL8 1493 aa19.82■□□□□ 0.76
CAGE1-206ENST00000502583 SUPT5HO00267 1087 aaKnown RBP19.54■□□□□ 0.72
CAGE1-206ENST00000502583 DCAF8L2P0C7V8 631 aa19.12■□□□□ 0.65
CAGE1-206ENST00000502583 ZCCHC6Q5VYS8 1495 aaKnown RBP19.04■□□□□ 0.64
CAGE1-206ENST00000502583 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
CAGE1-206ENST00000502583 CHIC1Q5VXU3 224 aa18.92■□□□□ 0.62
CAGE1-206ENST00000502583 CCDC180Q9P1Z9 1646 aa18.8■□□□□ 0.6
CAGE1-206ENST00000502583 PCGF6Q9BYE7 350 aa18.75■□□□□ 0.59
CAGE1-206ENST00000502583 HRCP23327 699 aa18.73■□□□□ 0.59
CAGE1-206ENST00000502583 PPARGC1BQ86YN6 1023 aaKnown RBP18.58■□□□□ 0.56
CAGE1-206ENST00000502583 LOC105371045A0A1W2PR82 267 aa18.57■□□□□ 0.56
CAGE1-206ENST00000502583 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
CAGE1-206ENST00000502583 EHMT2Q96KQ7 1210 aa18.15■□□□□ 0.5
CAGE1-206ENST00000502583 TRIM26Q12899 539 aaPredicted RBP18.13■□□□□ 0.49
CAGE1-206ENST00000502583 FAM9AQ8IZU1 332 aaPredicted RBP18.12■□□□□ 0.49
CAGE1-206ENST00000502583 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
CAGE1-206ENST00000502583 SCRIBQ14160 1630 aa18.02■□□□□ 0.47
CAGE1-206ENST00000502583 ABCC9O60706 1549 aa17.99■□□□□ 0.47
CAGE1-206ENST00000502583 RSF1Q96T23 1441 aaPredicted RBP17.99■□□□□ 0.47
CAGE1-206ENST00000502583 RB1CC1Q8TDY2 1594 aa17.87■□□□□ 0.45
CAGE1-206ENST00000502583 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
CAGE1-206ENST00000502583 ZEB1P37275 1124 aaPredicted RBP17.71■□□□□ 0.42
CAGE1-206ENST00000502583 MROH2BQ7Z745 1585 aa17.62■□□□□ 0.41
CAGE1-206ENST00000502583 TTBK1Q5TCY1 1321 aaPredicted RBP17.58■□□□□ 0.4
CAGE1-206ENST00000502583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.57■□□□□ 0.4
CAGE1-206ENST00000502583 WIZO95785 1651 aa17.55■□□□□ 0.4
CAGE1-206ENST00000502583 SCAF1Q9H7N4 1312 aaKnown RBP17.52■□□□□ 0.4
CAGE1-206ENST00000502583 CCER1Q8TC90 406 aaPredicted RBP17.46■□□□□ 0.39
CAGE1-206ENST00000502583 NACADO15069 1562 aa17.41■□□□□ 0.38
CAGE1-206ENST00000502583 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.38
CAGE1-206ENST00000502583 ABCC8Q09428 1581 aa17.33■□□□□ 0.36
CAGE1-206ENST00000502583 CCDC88BA6NC98 1476 aa17.28■□□□□ 0.36
CAGE1-206ENST00000502583 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
CAGE1-206ENST00000502583 NEUROD1Q13562 356 aa17.24■□□□□ 0.35
CAGE1-206ENST00000502583 EIF4G1Q04637 1599 aaKnown RBP17.23■□□□□ 0.35
CAGE1-206ENST00000502583 SOGA1O94964 1423 aa17.23■□□□□ 0.35
CAGE1-206ENST00000502583 DIEXFQ68CQ4 756 aaKnown RBP17.21■□□□□ 0.35
CAGE1-206ENST00000502583 UBTFP17480 764 aaKnown RBP17.2■□□□□ 0.34
CAGE1-206ENST00000502583 ACIN1Q9UKV3 1341 aaKnown RBP17.18■□□□□ 0.34
CAGE1-206ENST00000502583 CEP162Q5TB80 1403 aa17.18■□□□□ 0.34
CAGE1-206ENST00000502583 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
CAGE1-206ENST00000502583 TOP2AP11388 1531 aaKnown RBP17.11■□□□□ 0.33
CAGE1-206ENST00000502583 CSRNP3Q8WYN3 585 aa17.1■□□□□ 0.33
CAGE1-206ENST00000502583 GTF3C3Q9Y5Q9 886 aa17.1■□□□□ 0.33
CAGE1-206ENST00000502583 PABPN1Q86U42 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
CAGE1-206ENST00000502583 SMARCA2P51531 1590 aa17.09■□□□□ 0.33
CAGE1-206ENST00000502583 SMARCA4P51532 1647 aa17.08■□□□□ 0.32
CAGE1-206ENST00000502583 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
CAGE1-206ENST00000502583 TNIKQ9UKE5 1360 aa17.05■□□□□ 0.32
CAGE1-206ENST00000502583 RANGAP1P46060 587 aaPredicted RBP17.04■□□□□ 0.32
CAGE1-206ENST00000502583 HNRNPUL2Q1KMD3 747 aaKnown RBP17.04■□□□□ 0.32
CAGE1-206ENST00000502583 YTHDC1Q96MU7 727 aaKnown RBP17.02■□□□□ 0.32
CAGE1-206ENST00000502583 CENPBP07199 599 aaPredicted RBP17■□□□□ 0.31
CAGE1-206ENST00000502583 ZNF316A6NFI3 1004 aaPredicted RBP16.95■□□□□ 0.3
CAGE1-206ENST00000502583 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
CAGE1-206ENST00000502583 SLC24A1O60721 1099 aa16.91■□□□□ 0.3
CAGE1-206ENST00000502583 GOLGA3Q08378 1498 aa16.9■□□□□ 0.3
CAGE1-206ENST00000502583 EEA1Q15075 1411 aa16.87■□□□□ 0.29
CAGE1-206ENST00000502583 MIER1Q8N108 512 aa16.86■□□□□ 0.29
CAGE1-206ENST00000502583 MYT1Q01538 1121 aa16.85■□□□□ 0.29
CAGE1-206ENST00000502583 CLIP1P30622 1438 aa16.8■□□□□ 0.28
CAGE1-206ENST00000502583 SYNJ1O43426 1573 aa16.8■□□□□ 0.28
CAGE1-206ENST00000502583 APLP2Q06481 763 aa16.79■□□□□ 0.28
CAGE1-206ENST00000502583 CEP164Q9UPV0 1460 aa16.76■□□□□ 0.27
CAGE1-206ENST00000502583 RAPGEF2Q9Y4G8 1499 aa16.74■□□□□ 0.27
CAGE1-206ENST00000502583 BICRAQ9NZM4 1560 aa16.73■□□□□ 0.27
CAGE1-206ENST00000502583 VPS8Q8N3P4 1428 aa16.7■□□□□ 0.26
CAGE1-206ENST00000502583 KIF21BO75037 1637 aa16.66■□□□□ 0.26
CAGE1-206ENST00000502583 PRKCSHP14314 528 aaPredicted RBP16.64■□□□□ 0.25
CAGE1-206ENST00000502583 ATAD2BQ9ULI0 1458 aa16.63■□□□□ 0.25
CAGE1-206ENST00000502583 BAZ1BQ9UIG0 1483 aaKnown RBP16.62■□□□□ 0.25
CAGE1-206ENST00000502583 KANK4Q5T7N3 995 aaPredicted RBP16.61■□□□□ 0.25
CAGE1-206ENST00000502583 PEG3Q9GZU2 1588 aa16.58■□□□□ 0.25
CAGE1-206ENST00000502583 ITGAEP38570 1179 aa16.57■□□□□ 0.24
CAGE1-206ENST00000502583 DHX57Q6P158 1386 aaKnown RBP16.52■□□□□ 0.23
CAGE1-206ENST00000502583 ARAP1Q96P48 1450 aa16.47■□□□□ 0.23
CAGE1-206ENST00000502583 TOP2BQ02880 1626 aa16.46■□□□□ 0.23
CAGE1-206ENST00000502583 PRXQ9BXM0 1461 aa16.41■□□□□ 0.22
CAGE1-206ENST00000502583 KCNH8Q96L42 1107 aa16.38■□□□□ 0.21
CAGE1-206ENST00000502583 CUX1P39880 1505 aa16.35■□□□□ 0.21
CAGE1-206ENST00000502583 CLSPNQ9HAW4 1339 aa16.35■□□□□ 0.21
CAGE1-206ENST00000502583 SUPT16HQ9Y5B9 1047 aaKnown RBP16.35■□□□□ 0.21
CAGE1-206ENST00000502583 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
CAGE1-206ENST00000502583 ERICH3Q5RHP9 1530 aa16.33■□□□□ 0.2
CAGE1-206ENST00000502583 CCNB3Q8WWL7 1395 aa16.32■□□□□ 0.2
CAGE1-206ENST00000502583 KIF27Q86VH2 1401 aa16.32■□□□□ 0.2
CAGE1-206ENST00000502583 RRBP1Q9P2E9 1410 aaKnown RBP16.31■□□□□ 0.2
CAGE1-206ENST00000502583 ARHGAP35Q9NRY4 1499 aa16.3■□□□□ 0.2
CAGE1-206ENST00000502583 ATP1B4Q9UN42 357 aaPredicted RBP16.29■□□□□ 0.2
CAGE1-206ENST00000502583 P3H3Q8IVL6 736 aa16.29■□□□□ 0.2
CAGE1-206ENST00000502583 RAB3GAP2Q9H2M9 1393 aa16.26■□□□□ 0.19
CAGE1-206ENST00000502583 SIN3AQ96ST3 1273 aa16.26■□□□□ 0.19
CAGE1-206ENST00000502583 HIRIP3Q9BW71 556 aaPredicted RBP16.26■□□□□ 0.19
CAGE1-206ENST00000502583 FAM50AQ14320 339 aaKnown RBP16.25■□□□□ 0.19
CAGE1-206ENST00000502583 BCANQ96GW7 911 aa16.23■□□□□ 0.19
CAGE1-206ENST00000502583 DDX10Q13206 875 aaKnown RBP16.22■□□□□ 0.19
CAGE1-206ENST00000502583 CUX2O14529 1486 aa16.19■□□□□ 0.18
CAGE1-206ENST00000502583 NCAPD3P42695 1498 aa16.18■□□□□ 0.18
CAGE1-206ENST00000502583 IGF1RP08069 1367 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms