RNA–Protein interactions for RNA: ENST00000512596.5

TRIM60-204, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM60, Length 1,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-204ENST00000512596 AEBP2Q6ZN18 517 aaPredicted RBP17.92■□□□□ 0.46
TRIM60-204ENST00000512596 PELP1Q8IZL8 1130 aaKnown RBP17.42■□□□□ 0.38
TRIM60-204ENST00000512596 MYT1Q01538 1121 aa17.38■□□□□ 0.37
TRIM60-204ENST00000512596 CHIC1Q5VXU3 224 aa17.12■□□□□ 0.33
TRIM60-204ENST00000512596 TTBK1Q5TCY1 1321 aaPredicted RBP16.9■□□□□ 0.3
TRIM60-204ENST00000512596 SLC24A1O60721 1099 aa16.11■□□□□ 0.17
TRIM60-204ENST00000512596 ERICH6Q7L0X2 663 aa15.98■□□□□ 0.15
TRIM60-204ENST00000512596 PRKCSHP14314 528 aaPredicted RBP15.88■□□□□ 0.13
TRIM60-204ENST00000512596 APLP2Q06481 763 aa15.87■□□□□ 0.13
TRIM60-204ENST00000512596 DAXXQ9UER7 740 aaPredicted RBP15.46■□□□□ 0.06
TRIM60-204ENST00000512596 HRCP23327 699 aa15.43■□□□□ 0.06
TRIM60-204ENST00000512596 BCL11AQ9H165 835 aa15.34■□□□□ 0.05
TRIM60-204ENST00000512596 SENP3Q9H4L4 574 aaPredicted RBP15.25■□□□□ 0.03
TRIM60-204ENST00000512596 SCAF1Q9H7N4 1312 aaKnown RBP15.13■□□□□ 0.01
TRIM60-204ENST00000512596 PHF23Q9BUL5 403 aaPredicted RBP15.09■□□□□ 0.01
TRIM60-204ENST00000512596 FAM9AQ8IZU1 332 aaPredicted RBP15.03■□□□□ -0
TRIM60-204ENST00000512596 CENPBP07199 599 aaPredicted RBP14.95□□□□□ -0.02
TRIM60-204ENST00000512596 NISCHQ9Y2I1 1504 aa14.9□□□□□ -0.02
TRIM60-204ENST00000512596 EIF5BO60841 1220 aaKnown RBP14.82□□□□□ -0.04
TRIM60-204ENST00000512596 ANP32EQ9BTT0 268 aa14.55□□□□□ -0.08
TRIM60-204ENST00000512596 ACIN1Q9UKV3 1341 aaKnown RBP14.54□□□□□ -0.08
TRIM60-204ENST00000512596 UBE2Q2Q8WVN8 375 aa14.49□□□□□ -0.09
TRIM60-204ENST00000512596 PPARGC1BQ86YN6 1023 aaKnown RBP14.48□□□□□ -0.09
TRIM60-204ENST00000512596 ZEB1P37275 1124 aaPredicted RBP14.4□□□□□ -0.1
TRIM60-204ENST00000512596 NCBP3Q53F19 620 aaKnown RBP14.36□□□□□ -0.11
TRIM60-204ENST00000512596 GTF3C3Q9Y5Q9 886 aa14.29□□□□□ -0.12
TRIM60-204ENST00000512596 FOXD1Q16676 465 aa14.21□□□□□ -0.13
TRIM60-204ENST00000512596 NEUROD1Q13562 356 aa14.2□□□□□ -0.14
TRIM60-204ENST00000512596 ARXQ96QS3 562 aa14.2□□□□□ -0.14
TRIM60-204ENST00000512596 CSRNP3Q8WYN3 585 aa14.18□□□□□ -0.14
TRIM60-204ENST00000512596 PODXL2Q9NZ53 605 aa14.16□□□□□ -0.14
TRIM60-204ENST00000512596 RANGAP1P46060 587 aaPredicted RBP14.15□□□□□ -0.14
TRIM60-204ENST00000512596 PLEKHG5O94827 1062 aa14.14□□□□□ -0.15
TRIM60-204ENST00000512596 ERICH6BQ5W0A0 696 aa14.09□□□□□ -0.15
TRIM60-204ENST00000512596 PKNOX2Q96KN3 472 aa14.07□□□□□ -0.16
TRIM60-204ENST00000512596 PCGF6Q9BYE7 350 aa14.06□□□□□ -0.16
TRIM60-204ENST00000512596 MYT1LQ9UL68 1186 aa14.06□□□□□ -0.16
TRIM60-204ENST00000512596 ANO8Q9HCE9 1232 aaPredicted RBP14.02□□□□□ -0.16
TRIM60-204ENST00000512596 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
TRIM60-204ENST00000512596 CCDC180Q9P1Z9 1646 aa13.96□□□□□ -0.18
TRIM60-204ENST00000512596 ABCC9O60706 1549 aa13.92□□□□□ -0.18
TRIM60-204ENST00000512596 NEFLP07196 543 aa13.92□□□□□ -0.18
TRIM60-204ENST00000512596 DCAF1Q9Y4B6 1507 aa13.88□□□□□ -0.19
TRIM60-204ENST00000512596 PLPPR3Q6T4P5 718 aa13.76□□□□□ -0.21
TRIM60-204ENST00000512596 PDIA4P13667 645 aaKnown RBP13.74□□□□□ -0.21
TRIM60-204ENST00000512596 KLHL34Q8N239 644 aa13.73□□□□□ -0.21
TRIM60-204ENST00000512596 MYO15BQ96JP2 1530 aa13.71□□□□□ -0.21
TRIM60-204ENST00000512596 TSHZ2Q9NRE2 1034 aa13.7□□□□□ -0.22
TRIM60-204ENST00000512596 SALL2Q9Y467 1007 aaPredicted RBP13.7□□□□□ -0.22
TRIM60-204ENST00000512596 PDE4CQ08493 712 aa13.67□□□□□ -0.22
TRIM60-204ENST00000512596 TRIM26Q12899 539 aaPredicted RBP13.65□□□□□ -0.22
TRIM60-204ENST00000512596 HOMEZQ8IX15 550 aa13.63□□□□□ -0.23
TRIM60-204ENST00000512596 GLIPR1L2Q4G1C9 344 aa13.59□□□□□ -0.23
TRIM60-204ENST00000512596 TIMELESSQ9UNS1 1208 aa13.59□□□□□ -0.23
TRIM60-204ENST00000512596 RTN4Q9NQC3 1192 aaKnown RBP13.56□□□□□ -0.24
TRIM60-204ENST00000512596 FGD1P98174 961 aa13.55□□□□□ -0.24
TRIM60-204ENST00000512596 TAF7LQ5H9L4 462 aa13.54□□□□□ -0.24
TRIM60-204ENST00000512596 CCDC136Q96JN2 1154 aa13.48□□□□□ -0.25
TRIM60-204ENST00000512596 DEKP35659 375 aaKnown RBP13.45□□□□□ -0.26
TRIM60-204ENST00000512596 DIEXFQ68CQ4 756 aaKnown RBP13.45□□□□□ -0.26
TRIM60-204ENST00000512596 PPP6R1Q9UPN7 881 aa13.41□□□□□ -0.26
TRIM60-204ENST00000512596 ADRA2BP18089 450 aa13.39□□□□□ -0.27
TRIM60-204ENST00000512596 AAMPQ13685 434 aa13.39□□□□□ -0.27
TRIM60-204ENST00000512596 SUPT16HQ9Y5B9 1047 aaKnown RBP13.39□□□□□ -0.27
TRIM60-204ENST00000512596 PIAS4Q8N2W9 510 aaPredicted RBP13.35□□□□□ -0.27
TRIM60-204ENST00000512596 ZNF326Q5BKZ1 582 aaKnown RBP13.34□□□□□ -0.27
TRIM60-204ENST00000512596 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
TRIM60-204ENST00000512596 DNAJC5BQ9UF47 199 aa13.33□□□□□ -0.28
TRIM60-204ENST00000512596 FANCIQ9NVI1 1328 aa13.32□□□□□ -0.28
TRIM60-204ENST00000512596 BCL11BQ9C0K0 894 aaPredicted RBP13.32□□□□□ -0.28
TRIM60-204ENST00000512596 TULP1O00294 542 aaPredicted RBP13.31□□□□□ -0.28
TRIM60-204ENST00000512596 RSPH6AQ9H0K4 717 aa13.31□□□□□ -0.28
TRIM60-204ENST00000512596 ZMYND15Q9H091 742 aa13.3□□□□□ -0.28
TRIM60-204ENST00000512596 BRD2P25440 801 aaKnown RBP13.28□□□□□ -0.28
TRIM60-204ENST00000512596 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
TRIM60-204ENST00000512596 MSH5O43196 834 aa13.24□□□□□ -0.29
TRIM60-204ENST00000512596 RSPH4AQ5TD94 716 aa13.24□□□□□ -0.29
TRIM60-204ENST00000512596 RBM19Q9Y4C8 960 aaKnown RBP13.24□□□□□ -0.29
TRIM60-204ENST00000512596 RBM10P98175 930 aaKnown RBP13.23□□□□□ -0.29
TRIM60-204ENST00000512596 NPM2Q86SE8 214 aaKnown RBP13.23□□□□□ -0.29
TRIM60-204ENST00000512596 EHMT2Q96KQ7 1210 aa13.23□□□□□ -0.29
TRIM60-204ENST00000512596 TRIM41Q8WV44 630 aa13.21□□□□□ -0.29
TRIM60-204ENST00000512596 CCER1Q8TC90 406 aaPredicted RBP13.16□□□□□ -0.3
TRIM60-204ENST00000512596 FBXO3Q9UK99 471 aa13.16□□□□□ -0.3
TRIM60-204ENST00000512596 A0A0U1RQG5 324 aaPredicted RBP13.14□□□□□ -0.31
TRIM60-204ENST00000512596 VSIG10Q8N0Z9 540 aa13.12□□□□□ -0.31
TRIM60-204ENST00000512596 RB1CC1Q8TDY2 1594 aa13.12□□□□□ -0.31
TRIM60-204ENST00000512596 C11orf95C9JLR9 678 aaPredicted RBP13.12□□□□□ -0.31
TRIM60-204ENST00000512596 CDK11AQ9UQ88 783 aaPredicted RBP13.12□□□□□ -0.31
TRIM60-204ENST00000512596 CHMP4AQ9BY43 222 aa13.1□□□□□ -0.31
TRIM60-204ENST00000512596 YTHDC1Q96MU7 727 aaKnown RBP13.08□□□□□ -0.32
TRIM60-204ENST00000512596 DCAF8L2P0C7V8 631 aa13.07□□□□□ -0.32
TRIM60-204ENST00000512596 IL27Q8NEV9 243 aa13.04□□□□□ -0.32
TRIM60-204ENST00000512596 CNKSR2Q8WXI2 1034 aa13.03□□□□□ -0.32
TRIM60-204ENST00000512596 NAP1L5Q96NT1 182 aaPredicted RBP13.03□□□□□ -0.32
TRIM60-204ENST00000512596 BCCIPQ9P287 314 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRIM60-204ENST00000512596 C14orf37Q86TY3 774 aa13□□□□□ -0.33
TRIM60-204ENST00000512596 SAMD1Q6SPF0 538 aaPredicted RBP12.99□□□□□ -0.33
TRIM60-204ENST00000512596 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
TRIM60-204ENST00000512596 ZNF316A6NFI3 1004 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms