Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 AC069224.1-201ENST00000566372 1715 ntBASIC13.68□□□□□ -0.22
LRTM2Q8N967 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRTM2Q8N967 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRTM2Q8N967 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRTM2Q8N967 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRTM2Q8N967 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRTM2Q8N967 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRTM2Q8N967 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRTM2Q8N967 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRTM2Q8N967 AC243591.1-201ENST00000452967 1364 ntBASIC13.68□□□□□ -0.22
LRTM2Q8N967 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRTM2Q8N967 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRTM2Q8N967 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRTM2Q8N967 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRTM2Q8N967 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRTM2Q8N967 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRTM2Q8N967 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRTM2Q8N967 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LRTM2Q8N967 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.67□□□□□ -0.22
LRTM2Q8N967 AC016027.1-202ENST00000607927 1699 ntBASIC13.67□□□□□ -0.22
LRTM2Q8N967 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 MIR648-201ENST00000385046 94 ntBASIC13.67□□□□□ -0.22
LRTM2Q8N967 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 TSPY22P-201ENST00000427496 604 ntBASIC13.67□□□□□ -0.22
LRTM2Q8N967 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 SPDYE13P-201ENST00000445314 798 ntBASIC13.67□□□□□ -0.22
LRTM2Q8N967 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 REXO1L8P-201ENST00000604378 1897 ntBASIC13.67□□□□□ -0.22
LRTM2Q8N967 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LRTM2Q8N967 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRTM2Q8N967 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRTM2Q8N967 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRTM2Q8N967 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.66□□□□□ -0.22
LRTM2Q8N967 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRTM2Q8N967 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.66□□□□□ -0.22
LRTM2Q8N967 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRTM2Q8N967 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRTM2Q8N967 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRTM2Q8N967 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LRTM2Q8N967 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.66□□□□□ -0.22
LRTM2Q8N967 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRTM2Q8N967 PPT1-215ENST00000641471 2368 ntBASIC13.66□□□□□ -0.22
LRTM2Q8N967 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRTM2Q8N967 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRTM2Q8N967 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.66□□□□□ -0.22
LRTM2Q8N967 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRTM2Q8N967 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.66□□□□□ -0.22
LRTM2Q8N967 AC004817.3-201ENST00000602957 2129 ntBASIC13.66□□□□□ -0.22
LRTM2Q8N967 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.66□□□□□ -0.22
LRTM2Q8N967 PCGF3-213ENST00000620529 1899 ntBASIC13.66□□□□□ -0.22
LRTM2Q8N967 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRTM2Q8N967 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRTM2Q8N967 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LRTM2Q8N967 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LRTM2Q8N967 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms