Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN22Q8N7P3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 MIR3652-201ENST00000579335 131 ntBASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN22Q8N7P3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN22Q8N7P3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CLDN22Q8N7P3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN22Q8N7P3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN22Q8N7P3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN22Q8N7P3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
CLDN22Q8N7P3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.27■□□□□ 0.03
CLDN22Q8N7P3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN22Q8N7P3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN22Q8N7P3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.27■□□□□ 0.03
CLDN22Q8N7P3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.27■□□□□ 0.03
CLDN22Q8N7P3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN22Q8N7P3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CLDN22Q8N7P3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 TOP3BP1-201ENST00000420768 1380 ntBASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 AC002310.6-201ENST00000624451 1377 ntBASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 AC064862.7-201ENST00000604520 867 ntBASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 AC012313.10-201ENST00000623509 926 ntBASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 AC068418.2-201ENST00000577309 3703 ntBASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN22Q8N7P3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 AC092384.3-202ENST00000564646 2873 ntBASIC15.25■□□□□ 0.03
CLDN22Q8N7P3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms