Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 MIR718-201ENST00000390190 70 ntBASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 AF186192.3-201ENST00000583427 947 ntBASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 AL359736.2-201ENST00000621992 437 ntBASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 LINC00167-201ENST00000530583 1419 ntBASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 FSCN1P1-201ENST00000568912 1481 ntBASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP4Q6PIL6 AL731571.1-201ENST00000617058 5428 ntBASIC13□□□□□ -0.33
KCNIP4Q6PIL6 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 AP005117.1-202ENST00000581724 1908 ntBASIC13□□□□□ -0.33
KCNIP4Q6PIL6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 TK1-204ENST00000590430 683 ntTSL 3 BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 AP006294.2-201ENST00000641667 209 ntBASIC13□□□□□ -0.33
KCNIP4Q6PIL6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
KCNIP4Q6PIL6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms