Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCDC62Q6P9F0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 AC092580.3-201ENST00000430932 139 ntBASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 SNX33P1-201ENST00000592116 1762 ntBASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCDC62Q6P9F0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 RARRES2P9-201ENST00000565168 469 ntBASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 AP3S2-216ENST00000617003 1561 ntBASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC62Q6P9F0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 AC069120.2-201ENST00000524091 540 ntBASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC62Q6P9F0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms