Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP6V1AP38606 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V1AP38606 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP6V1AP38606 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V1AP38606 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ATP6V1AP38606 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ATP6V1AP38606 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V1AP38606 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6V1AP38606 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V1AP38606 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V1AP38606 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V1AP38606 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V1AP38606 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V1AP38606 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V1AP38606 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V1AP38606 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V1AP38606 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V1AP38606 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V1AP38606 SRD5A3P1-201ENST00000603021 949 ntBASIC21.09■□□□□ 0.97
ATP6V1AP38606 Six3os1_5.1-201ENST00000611000 271 ntBASIC21.09■□□□□ 0.97
ATP6V1AP38606 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V1AP38606 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 AC092053.1-201ENST00000605787 1936 ntBASIC21.09■□□□□ 0.97
ATP6V1AP38606 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP6V1AP38606 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V1AP38606 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6V1AP38606 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ATP6V1AP38606 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6V1AP38606 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC21.08■□□□□ 0.97
ATP6V1AP38606 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ATP6V1AP38606 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6V1AP38606 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.08■□□□□ 0.97
ATP6V1AP38606 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6V1AP38606 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6V1AP38606 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6V1AP38606 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ATP6V1AP38606 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6V1AP38606 RN7SL837P-201ENST00000463010 287 ntBASIC21.08■□□□□ 0.97
ATP6V1AP38606 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC21.08■□□□□ 0.97
ATP6V1AP38606 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC21.08■□□□□ 0.97
ATP6V1AP38606 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC21.08■□□□□ 0.97
ATP6V1AP38606 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ATP6V1AP38606 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
ATP6V1AP38606 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
ATP6V1AP38606 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC21.08■□□□□ 0.97
ATP6V1AP38606 AL033527.5-202ENST00000641632 1098 ntBASIC21.08■□□□□ 0.97
ATP6V1AP38606 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.08■□□□□ 0.96
ATP6V1AP38606 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.08■□□□□ 0.96
ATP6V1AP38606 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.08■□□□□ 0.96
ATP6V1AP38606 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
ATP6V1AP38606 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.08■□□□□ 0.96
ATP6V1AP38606 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC21.08■□□□□ 0.96
ATP6V1AP38606 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ATP6V1AP38606 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
ATP6V1AP38606 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
ATP6V1AP38606 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP6V1AP38606 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
ATP6V1AP38606 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ATP6V1AP38606 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ATP6V1AP38606 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V1AP38606 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP6V1AP38606 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V1AP38606 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ATP6V1AP38606 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V1AP38606 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V1AP38606 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
ATP6V1AP38606 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V1AP38606 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V1AP38606 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP6V1AP38606 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V1AP38606 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V1AP38606 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V1AP38606 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V1AP38606 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V1AP38606 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V1AP38606 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6V1AP38606 SERBP1P3-201ENST00000459980 809 ntBASIC21.07■□□□□ 0.96
ATP6V1AP38606 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP6V1AP38606 GLI4-203ENST00000517468 963 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP6V1AP38606 AC055876.2-201ENST00000531834 546 ntBASIC21.07■□□□□ 0.96
ATP6V1AP38606 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP6V1AP38606 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ATP6V1AP38606 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms