Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.83□□□□□ -0.2
SNCAP37840 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SNCAP37840 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 AC103564.2-201ENST00000432853 1299 ntBASIC13.83□□□□□ -0.2
SNCAP37840 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.83□□□□□ -0.2
SNCAP37840 VENTXP5-201ENST00000523979 775 ntBASIC13.83□□□□□ -0.2
SNCAP37840 LINC01238-205ENST00000567549 1107 ntBASIC13.83□□□□□ -0.2
SNCAP37840 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SNCAP37840 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.83□□□□□ -0.2
SNCAP37840 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SNCAP37840 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SNCAP37840 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
SNCAP37840 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
SNCAP37840 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.82□□□□□ -0.2
SNCAP37840 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.82□□□□□ -0.2
SNCAP37840 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SNCAP37840 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.82□□□□□ -0.2
SNCAP37840 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.82□□□□□ -0.2
SNCAP37840 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SNCAP37840 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.82□□□□□ -0.2
SNCAP37840 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.82□□□□□ -0.2
SNCAP37840 AC007967.3-201ENST00000434308 558 ntBASIC13.82□□□□□ -0.2
SNCAP37840 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 KRT18P38-201ENST00000449496 1282 ntBASIC13.82□□□□□ -0.2
SNCAP37840 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.82□□□□□ -0.2
SNCAP37840 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.82□□□□□ -0.2
SNCAP37840 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.82□□□□□ -0.2
SNCAP37840 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SNCAP37840 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
SNCAP37840 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SNCAP37840 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.82□□□□□ -0.2
SNCAP37840 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.82□□□□□ -0.2
SNCAP37840 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SNCAP37840 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SNCAP37840 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNCAP37840 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SNCAP37840 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 AC073508.3-201ENST00000619697 1419 ntBASIC13.81□□□□□ -0.2
SNCAP37840 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.81□□□□□ -0.2
SNCAP37840 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.81□□□□□ -0.2
SNCAP37840 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.81□□□□□ -0.2
SNCAP37840 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
SNCAP37840 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.81□□□□□ -0.2
SNCAP37840 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.81□□□□□ -0.2
SNCAP37840 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SNCAP37840 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SNCAP37840 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.81□□□□□ -0.2
SNCAP37840 KRT18P57-201ENST00000443599 1254 ntBASIC13.81□□□□□ -0.2
SNCAP37840 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.81□□□□□ -0.2
SNCAP37840 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms