Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TNFRSF1BP20333 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.58■□□□□ 0.09
TNFRSF1BP20333 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
TNFRSF1BP20333 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TNFRSF1BP20333 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.58■□□□□ 0.09
TNFRSF1BP20333 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
TNFRSF1BP20333 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
TNFRSF1BP20333 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TNFRSF1BP20333 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 AL358472.4-201ENST00000633140 710 ntBASIC15.58■□□□□ 0.08
TNFRSF1BP20333 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 AP005117.1-201ENST00000584346 1413 ntBASIC15.58■□□□□ 0.08
TNFRSF1BP20333 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TNFRSF1BP20333 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 AC010491.1-201ENST00000563101 2797 ntBASIC15.57■□□□□ 0.08
TNFRSF1BP20333 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 AC132008.2-207ENST00000454517 770 ntBASIC15.57■□□□□ 0.08
TNFRSF1BP20333 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 AC013467.2-201ENST00000605472 835 ntBASIC15.57■□□□□ 0.08
TNFRSF1BP20333 AC069148.1-201ENST00000608741 768 ntBASIC15.57■□□□□ 0.08
TNFRSF1BP20333 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 AP000550.4-202ENST00000639755 178 ntBASIC15.57■□□□□ 0.08
TNFRSF1BP20333 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 GGT3P-204ENST00000453783 1664 ntBASIC15.57■□□□□ 0.08
TNFRSF1BP20333 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNFRSF1BP20333 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 AL596087.1-201ENST00000400979 1969 ntBASIC15.56■□□□□ 0.08
TNFRSF1BP20333 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TNFRSF1BP20333 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms