Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT4P19013 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT4P19013 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT4P19013 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT4P19013 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.83■□□□□ 0.28
KRT4P19013 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT4P19013 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.83■□□□□ 0.28
KRT4P19013 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT4P19013 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT4P19013 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT4P19013 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT4P19013 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
KRT4P19013 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT4P19013 AL671710.1-201ENST00000610245 2349 ntBASIC16.83■□□□□ 0.28
KRT4P19013 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
KRT4P19013 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
KRT4P19013 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
KRT4P19013 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT4P19013 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT4P19013 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT4P19013 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT4P19013 AC144831.1-201ENST00000573312 2656 ntBASIC16.83■□□□□ 0.28
KRT4P19013 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
KRT4P19013 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
KRT4P19013 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KRT4P19013 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 INTS4P1-201ENST00000438455 1935 ntBASIC16.82■□□□□ 0.28
KRT4P19013 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT4P19013 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT4P19013 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 GGT4P-201ENST00000623672 1708 ntBASIC16.82■□□□□ 0.28
KRT4P19013 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT4P19013 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
KRT4P19013 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
KRT4P19013 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
KRT4P19013 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT4P19013 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT4P19013 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
KRT4P19013 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT4P19013 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
KRT4P19013 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KRT4P19013 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
KRT4P19013 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT4P19013 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.82■□□□□ 0.28
KRT4P19013 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.82■□□□□ 0.28
KRT4P19013 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KRT4P19013 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
KRT4P19013 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT4P19013 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT4P19013 AC006449.6-201ENST00000612330 2296 ntBASIC16.81■□□□□ 0.28
KRT4P19013 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
KRT4P19013 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.81■□□□□ 0.28
KRT4P19013 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT4P19013 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT4P19013 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 SPDYE21P-201ENST00000413323 827 ntBASIC16.81■□□□□ 0.28
KRT4P19013 AC104076.2-201ENST00000448912 469 ntBASIC16.81■□□□□ 0.28
KRT4P19013 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
KRT4P19013 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT4P19013 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.81■□□□□ 0.28
KRT4P19013 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT4P19013 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.81■□□□□ 0.28
KRT4P19013 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
KRT4P19013 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT4P19013 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.81■□□□□ 0.28
KRT4P19013 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
KRT4P19013 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KRT4P19013 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms