Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAP43P17677 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAP43P17677 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAP43P17677 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAP43P17677 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAP43P17677 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.41■□□□□ 0.54
GAP43P17677 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.41■□□□□ 0.54
GAP43P17677 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GAP43P17677 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GAP43P17677 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GAP43P17677 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
GAP43P17677 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAP43P17677 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.4■□□□□ 0.54
GAP43P17677 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAP43P17677 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.4■□□□□ 0.54
GAP43P17677 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
GAP43P17677 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAP43P17677 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAP43P17677 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAP43P17677 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
GAP43P17677 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GAP43P17677 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GAP43P17677 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
GAP43P17677 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.4■□□□□ 0.54
GAP43P17677 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GAP43P17677 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.4■□□□□ 0.54
GAP43P17677 AC074386.1-202ENST00000463561 864 ntBASIC18.4■□□□□ 0.54
GAP43P17677 AC068137.2-201ENST00000605408 478 ntBASIC18.4■□□□□ 0.54
GAP43P17677 AL513190.1-201ENST00000621254 727 ntBASIC18.4■□□□□ 0.54
GAP43P17677 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GAP43P17677 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.4■□□□□ 0.54
GAP43P17677 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
GAP43P17677 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.39■□□□□ 0.53
GAP43P17677 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GAP43P17677 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.39■□□□□ 0.53
GAP43P17677 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.39■□□□□ 0.53
GAP43P17677 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GAP43P17677 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.39■□□□□ 0.53
GAP43P17677 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.39■□□□□ 0.53
GAP43P17677 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.39■□□□□ 0.53
GAP43P17677 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.39■□□□□ 0.53
GAP43P17677 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.39■□□□□ 0.53
GAP43P17677 AC092865.6-201ENST00000642101 219 ntBASIC18.39■□□□□ 0.53
GAP43P17677 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
GAP43P17677 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GAP43P17677 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GAP43P17677 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
GAP43P17677 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
GAP43P17677 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
GAP43P17677 ME2P1-201ENST00000426028 1970 ntBASIC18.39■□□□□ 0.53
GAP43P17677 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GAP43P17677 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
GAP43P17677 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAP43P17677 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GAP43P17677 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.38■□□□□ 0.53
GAP43P17677 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GAP43P17677 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.38■□□□□ 0.53
GAP43P17677 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.38■□□□□ 0.53
GAP43P17677 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
GAP43P17677 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GAP43P17677 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAP43P17677 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAP43P17677 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAP43P17677 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAP43P17677 MIR940-201ENST00000401276 94 ntBASIC18.38■□□□□ 0.53
GAP43P17677 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.38■□□□□ 0.53
GAP43P17677 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAP43P17677 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.38■□□□□ 0.53
GAP43P17677 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAP43P17677 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GAP43P17677 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
GAP43P17677 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GAP43P17677 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.38■□□□□ 0.53
GAP43P17677 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAP43P17677 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.38■□□□□ 0.53
GAP43P17677 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.38■□□□□ 0.53
GAP43P17677 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GAP43P17677 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GAP43P17677 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAP43P17677 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.38■□□□□ 0.53
GAP43P17677 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.38■□□□□ 0.53
GAP43P17677 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GAP43P17677 LINC01144-201ENST00000626198 1710 ntBASIC18.37■□□□□ 0.53
GAP43P17677 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
GAP43P17677 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAP43P17677 AC099398.1-201ENST00000567919 2776 ntBASIC18.37■□□□□ 0.53
GAP43P17677 PCGF3-213ENST00000620529 1899 ntBASIC18.37■□□□□ 0.53
GAP43P17677 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
GAP43P17677 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GAP43P17677 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAP43P17677 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAP43P17677 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAP43P17677 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAP43P17677 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAP43P17677 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAP43P17677 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
GAP43P17677 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
GAP43P17677 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GAP43P17677 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GAP43P17677 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms