Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFNB1P01574 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFNB1P01574 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.35■□□□□ 0.37
IFNB1P01574 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.35■□□□□ 0.37
IFNB1P01574 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.35■□□□□ 0.37
IFNB1P01574 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IFNB1P01574 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.35■□□□□ 0.37
IFNB1P01574 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IFNB1P01574 MIR3652-201ENST00000579335 131 ntBASIC17.35■□□□□ 0.37
IFNB1P01574 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.35■□□□□ 0.37
IFNB1P01574 AL139424.1-201ENST00000607572 797 ntBASIC17.35■□□□□ 0.37
IFNB1P01574 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IFNB1P01574 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFNB1P01574 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFNB1P01574 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFNB1P01574 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.35■□□□□ 0.37
IFNB1P01574 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFNB1P01574 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFNB1P01574 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IFNB1P01574 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.35■□□□□ 0.37
IFNB1P01574 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFNB1P01574 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.35■□□□□ 0.37
IFNB1P01574 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IFNB1P01574 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFNB1P01574 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
IFNB1P01574 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
IFNB1P01574 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IFNB1P01574 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IFNB1P01574 AC046158.3-201ENST00000624947 2558 ntBASIC17.35■□□□□ 0.37
IFNB1P01574 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
IFNB1P01574 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.34■□□□□ 0.37
IFNB1P01574 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
IFNB1P01574 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFNB1P01574 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
IFNB1P01574 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFNB1P01574 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFNB1P01574 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFNB1P01574 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.34■□□□□ 0.37
IFNB1P01574 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFNB1P01574 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IFNB1P01574 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
IFNB1P01574 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IFNB1P01574 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IFNB1P01574 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.34■□□□□ 0.37
IFNB1P01574 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFNB1P01574 HCG4P8-203ENST00000443049 980 ntBASIC17.34■□□□□ 0.37
IFNB1P01574 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.34■□□□□ 0.37
IFNB1P01574 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFNB1P01574 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
IFNB1P01574 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.34■□□□□ 0.37
IFNB1P01574 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IFNB1P01574 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.34■□□□□ 0.37
IFNB1P01574 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IFNB1P01574 AC132872.4-202ENST00000622924 2756 ntBASIC17.34■□□□□ 0.37
IFNB1P01574 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.34■□□□□ 0.37
IFNB1P01574 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
IFNB1P01574 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
IFNB1P01574 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFNB1P01574 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFNB1P01574 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IFNB1P01574 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFNB1P01574 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IFNB1P01574 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFNB1P01574 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
IFNB1P01574 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
IFNB1P01574 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFNB1P01574 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFNB1P01574 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.33■□□□□ 0.37
IFNB1P01574 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
IFNB1P01574 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
IFNB1P01574 TSPY26P-202ENST00000565928 3884 ntBASIC17.33■□□□□ 0.37
IFNB1P01574 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.33■□□□□ 0.37
IFNB1P01574 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.33■□□□□ 0.37
IFNB1P01574 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
IFNB1P01574 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFNB1P01574 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFNB1P01574 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFNB1P01574 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.33■□□□□ 0.37
IFNB1P01574 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.33■□□□□ 0.37
IFNB1P01574 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IFNB1P01574 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.33■□□□□ 0.37
IFNB1P01574 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.33■□□□□ 0.37
IFNB1P01574 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
IFNB1P01574 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.33■□□□□ 0.36
IFNB1P01574 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 MIR1224-201ENST00000408193 85 ntBASIC17.33■□□□□ 0.36
IFNB1P01574 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.33■□□□□ 0.36
IFNB1P01574 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IFNB1P01574 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.33■□□□□ 0.36
IFNB1P01574 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.33■□□□□ 0.36
IFNB1P01574 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.33■□□□□ 0.36
IFNB1P01574 AL589182.2-201ENST00000619332 1049 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms