Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
PTP4A3O75365 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.09■□□□□ 0.01
PTP4A3O75365 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 AKR1C7P-201ENST00000305623 895 ntBASIC15.09■□□□□ 0.01
PTP4A3O75365 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.09■□□□□ 0.01
PTP4A3O75365 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
PTP4A3O75365 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.09■□□□□ 0.01
PTP4A3O75365 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.09■□□□□ 0.01
PTP4A3O75365 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.09■□□□□ 0.01
PTP4A3O75365 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.09■□□□□ 0.01
PTP4A3O75365 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.09■□□□□ 0.01
PTP4A3O75365 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.09■□□□□ 0.01
PTP4A3O75365 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.09■□□□□ 0.01
PTP4A3O75365 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PTP4A3O75365 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PTP4A3O75365 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PTP4A3O75365 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.09■□□□□ 0.01
PTP4A3O75365 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.09■□□□□ 0.01
PTP4A3O75365 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.09■□□□□ 0.01
PTP4A3O75365 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PTP4A3O75365 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.09■□□□□ 0.01
PTP4A3O75365 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.09■□□□□ 0.01
PTP4A3O75365 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PTP4A3O75365 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.09■□□□□ 0.01
PTP4A3O75365 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PTP4A3O75365 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.08■□□□□ 0.01
PTP4A3O75365 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PTP4A3O75365 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.08■□□□□ 0.01
PTP4A3O75365 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTP4A3O75365 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PTP4A3O75365 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.08■□□□□ 0
PTP4A3O75365 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTP4A3O75365 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.08■□□□□ 0
PTP4A3O75365 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTP4A3O75365 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTP4A3O75365 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTP4A3O75365 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTP4A3O75365 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PTP4A3O75365 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PTP4A3O75365 HCG4P8-203ENST00000443049 980 ntBASIC15.08■□□□□ 0
PTP4A3O75365 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.08■□□□□ 0
PTP4A3O75365 AF238378.1-201ENST00000526806 358 ntBASIC15.08■□□□□ 0
PTP4A3O75365 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.08■□□□□ 0
PTP4A3O75365 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.08■□□□□ 0
PTP4A3O75365 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.08■□□□□ 0
PTP4A3O75365 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTP4A3O75365 CYP2A7P1-201ENST00000595391 815 ntBASIC15.08■□□□□ 0
PTP4A3O75365 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.08■□□□□ 0
PTP4A3O75365 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PTP4A3O75365 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PTP4A3O75365 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTP4A3O75365 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PTP4A3O75365 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.08■□□□□ 0
PTP4A3O75365 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PTP4A3O75365 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTP4A3O75365 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PTP4A3O75365 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTP4A3O75365 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PTP4A3O75365 AL353732.1-201ENST00000569618 1459 ntBASIC15.08■□□□□ 0
PTP4A3O75365 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PTP4A3O75365 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PTP4A3O75365 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.07■□□□□ 0
PTP4A3O75365 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTP4A3O75365 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTP4A3O75365 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTP4A3O75365 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.07■□□□□ 0
PTP4A3O75365 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTP4A3O75365 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PTP4A3O75365 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTP4A3O75365 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
PTP4A3O75365 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PTP4A3O75365 MIR1224-201ENST00000408193 85 ntBASIC15.07■□□□□ 0
PTP4A3O75365 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PTP4A3O75365 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.07■□□□□ 0
PTP4A3O75365 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.07■□□□□ 0
PTP4A3O75365 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.07■□□□□ 0
PTP4A3O75365 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.07■□□□□ 0
PTP4A3O75365 AC107918.2-201ENST00000530817 355 ntBASIC15.07■□□□□ 0
PTP4A3O75365 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.07■□□□□ 0
PTP4A3O75365 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.07■□□□□ 0
PTP4A3O75365 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PTP4A3O75365 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.07■□□□□ 0
PTP4A3O75365 AC107918.4-202ENST00000641623 219 ntBASIC15.07■□□□□ 0
PTP4A3O75365 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.07■□□□□ 0
PTP4A3O75365 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PTP4A3O75365 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.07■□□□□ 0
PTP4A3O75365 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.07■□□□□ 0
PTP4A3O75365 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PTP4A3O75365 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms