Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.88□□□□□ -0.03
GMDSO60547 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GMDSO60547 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GMDSO60547 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GMDSO60547 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
GMDSO60547 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.88□□□□□ -0.03
GMDSO60547 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GMDSO60547 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GMDSO60547 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GMDSO60547 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.88□□□□□ -0.03
GMDSO60547 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GMDSO60547 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.88□□□□□ -0.03
GMDSO60547 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.88□□□□□ -0.03
GMDSO60547 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GMDSO60547 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
GMDSO60547 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
GMDSO60547 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
GMDSO60547 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.87□□□□□ -0.03
GMDSO60547 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.87□□□□□ -0.03
GMDSO60547 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.87□□□□□ -0.03
GMDSO60547 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.87□□□□□ -0.03
GMDSO60547 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.87□□□□□ -0.03
GMDSO60547 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GMDSO60547 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 LINC02228-204ENST00000642115 2962 ntBASIC14.87□□□□□ -0.03
GMDSO60547 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
GMDSO60547 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
GMDSO60547 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GMDSO60547 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GMDSO60547 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.87□□□□□ -0.03
GMDSO60547 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.87□□□□□ -0.03
GMDSO60547 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.87□□□□□ -0.03
GMDSO60547 AL020989.1-201ENST00000422979 469 ntBASIC14.87□□□□□ -0.03
GMDSO60547 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GMDSO60547 AC132008.2-207ENST00000454517 770 ntBASIC14.87□□□□□ -0.03
GMDSO60547 KRT18P56-201ENST00000507275 550 ntBASIC14.87□□□□□ -0.03
GMDSO60547 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.87□□□□□ -0.03
GMDSO60547 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.87□□□□□ -0.03
GMDSO60547 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
GMDSO60547 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.87□□□□□ -0.03
GMDSO60547 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.87□□□□□ -0.03
GMDSO60547 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
GMDSO60547 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.87□□□□□ -0.03
GMDSO60547 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.87□□□□□ -0.03
GMDSO60547 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GMDSO60547 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.87□□□□□ -0.03
GMDSO60547 FLJ16779-201ENST00000612722 7638 ntBASIC14.87□□□□□ -0.03
GMDSO60547 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GMDSO60547 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GMDSO60547 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GMDSO60547 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GMDSO60547 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GMDSO60547 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.86□□□□□ -0.03
GMDSO60547 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
GMDSO60547 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
GMDSO60547 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.86□□□□□ -0.03
GMDSO60547 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.86□□□□□ -0.03
GMDSO60547 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GMDSO60547 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GMDSO60547 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GMDSO60547 AP005117.1-201ENST00000584346 1413 ntBASIC14.86□□□□□ -0.03
GMDSO60547 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.86□□□□□ -0.03
GMDSO60547 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.86□□□□□ -0.03
GMDSO60547 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GMDSO60547 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GMDSO60547 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GMDSO60547 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.86□□□□□ -0.03
GMDSO60547 RBM17P3-201ENST00000417687 1192 ntBASIC14.86□□□□□ -0.03
GMDSO60547 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
GMDSO60547 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.86□□□□□ -0.03
GMDSO60547 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.86□□□□□ -0.03
GMDSO60547 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GMDSO60547 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.86□□□□□ -0.03
GMDSO60547 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.86□□□□□ -0.03
GMDSO60547 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.86□□□□□ -0.03
GMDSO60547 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.86□□□□□ -0.03
GMDSO60547 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.86□□□□□ -0.03
GMDSO60547 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms