Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HOXA2O43364 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.76■□□□□ 0.43
HOXA2O43364 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.76■□□□□ 0.43
HOXA2O43364 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.76■□□□□ 0.43
HOXA2O43364 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.76■□□□□ 0.43
HOXA2O43364 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.76■□□□□ 0.43
HOXA2O43364 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.76■□□□□ 0.43
HOXA2O43364 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HOXA2O43364 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
HOXA2O43364 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXA2O43364 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXA2O43364 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXA2O43364 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXA2O43364 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.76■□□□□ 0.43
HOXA2O43364 NOC2LP2-201ENST00000407594 1944 ntBASIC17.76■□□□□ 0.43
HOXA2O43364 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HOXA2O43364 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXA2O43364 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HOXA2O43364 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HOXA2O43364 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HOXA2O43364 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HOXA2O43364 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HOXA2O43364 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HOXA2O43364 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXA2O43364 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXA2O43364 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HOXA2O43364 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXA2O43364 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXA2O43364 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXA2O43364 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HOXA2O43364 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXA2O43364 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HOXA2O43364 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HOXA2O43364 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
HOXA2O43364 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXA2O43364 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
HOXA2O43364 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HOXA2O43364 RPL37AP1-201ENST00000412502 279 ntBASIC17.75■□□□□ 0.43
HOXA2O43364 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.75■□□□□ 0.43
HOXA2O43364 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXA2O43364 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.75■□□□□ 0.43
HOXA2O43364 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HOXA2O43364 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.75■□□□□ 0.43
HOXA2O43364 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.75■□□□□ 0.43
HOXA2O43364 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
HOXA2O43364 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.75■□□□□ 0.43
HOXA2O43364 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.75■□□□□ 0.43
HOXA2O43364 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HOXA2O43364 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
HOXA2O43364 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.75■□□□□ 0.43
HOXA2O43364 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXA2O43364 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HOXA2O43364 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXA2O43364 NEFHP1-201ENST00000412845 2629 ntBASIC17.75■□□□□ 0.43
HOXA2O43364 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXA2O43364 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXA2O43364 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HOXA2O43364 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXA2O43364 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.75■□□□□ 0.43
HOXA2O43364 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HOXA2O43364 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HOXA2O43364 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.74■□□□□ 0.43
HOXA2O43364 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
HOXA2O43364 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.74■□□□□ 0.43
HOXA2O43364 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HOXA2O43364 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.74■□□□□ 0.43
HOXA2O43364 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.74■□□□□ 0.43
HOXA2O43364 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.74■□□□□ 0.43
HOXA2O43364 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.74■□□□□ 0.43
HOXA2O43364 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HOXA2O43364 ZNF890P-202ENST00000530367 1156 ntBASIC17.74■□□□□ 0.43
HOXA2O43364 AL079307.3-201ENST00000556114 283 ntBASIC17.74■□□□□ 0.43
HOXA2O43364 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.74■□□□□ 0.43
HOXA2O43364 AC026979.3-201ENST00000607315 403 ntBASIC17.74■□□□□ 0.43
HOXA2O43364 AL844908.2-201ENST00000609461 460 ntBASIC17.74■□□□□ 0.43
HOXA2O43364 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.74■□□□□ 0.43
HOXA2O43364 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.74■□□□□ 0.43
HOXA2O43364 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.74■□□□□ 0.43
HOXA2O43364 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 BTBD7P1-201ENST00000447253 1453 ntBASIC17.74■□□□□ 0.43
HOXA2O43364 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.74■□□□□ 0.43
HOXA2O43364 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.74■□□□□ 0.43
HOXA2O43364 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HOXA2O43364 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXA2O43364 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms