Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.91■□□□□ 0.3
AP3B1O00203 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 MRPL20P1-201ENST00000400819 433 ntBASIC16.91■□□□□ 0.3
AP3B1O00203 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.91■□□□□ 0.3
AP3B1O00203 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.91■□□□□ 0.3
AP3B1O00203 FAM197Y8-203ENST00000450145 560 ntBASIC16.91■□□□□ 0.3
AP3B1O00203 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.91■□□□□ 0.3
AP3B1O00203 POU5F1P6-201ENST00000466990 990 ntBASIC16.91■□□□□ 0.3
AP3B1O00203 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.91■□□□□ 0.3
AP3B1O00203 TP73-AS1-207ENST00000624167 988 ntBASIC16.91■□□□□ 0.3
AP3B1O00203 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.91■□□□□ 0.3
AP3B1O00203 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.91■□□□□ 0.3
AP3B1O00203 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
AP3B1O00203 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.91■□□□□ 0.3
AP3B1O00203 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
AP3B1O00203 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
AP3B1O00203 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3B1O00203 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.9■□□□□ 0.3
AP3B1O00203 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.9■□□□□ 0.3
AP3B1O00203 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.9■□□□□ 0.3
AP3B1O00203 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.9■□□□□ 0.3
AP3B1O00203 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.9■□□□□ 0.3
AP3B1O00203 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
AP3B1O00203 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
AP3B1O00203 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AP3B1O00203 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
AP3B1O00203 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.9■□□□□ 0.3
AP3B1O00203 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.9■□□□□ 0.3
AP3B1O00203 PMS2P1-201ENST00000431037 1228 ntBASIC16.9■□□□□ 0.3
AP3B1O00203 KRT18P67-201ENST00000432816 1264 ntBASIC16.9■□□□□ 0.3
AP3B1O00203 AC018712.1-201ENST00000455767 687 ntBASIC16.9■□□□□ 0.3
AP3B1O00203 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.9■□□□□ 0.3
AP3B1O00203 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.9■□□□□ 0.3
AP3B1O00203 AC020765.3-201ENST00000613051 740 ntBASIC16.9■□□□□ 0.3
AP3B1O00203 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AP3B1O00203 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 SLC22A20-204ENST00000530038 1673 ntBASIC16.9■□□□□ 0.3
AP3B1O00203 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
AP3B1O00203 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.9■□□□□ 0.3
AP3B1O00203 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
AP3B1O00203 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.9■□□□□ 0.3
AP3B1O00203 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.9■□□□□ 0.3
AP3B1O00203 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3B1O00203 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AP3B1O00203 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.89■□□□□ 0.3
AP3B1O00203 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
AP3B1O00203 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
AP3B1O00203 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
AP3B1O00203 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.89■□□□□ 0.3
AP3B1O00203 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
AP3B1O00203 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
AP3B1O00203 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.89■□□□□ 0.29
AP3B1O00203 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP3B1O00203 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
AP3B1O00203 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.89■□□□□ 0.29
AP3B1O00203 AL031731.1-201ENST00000642131 2094 ntBASIC16.89■□□□□ 0.29
AP3B1O00203 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
AP3B1O00203 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.89■□□□□ 0.29
AP3B1O00203 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3B1O00203 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP3B1O00203 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP3B1O00203 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP3B1O00203 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
AP3B1O00203 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.89■□□□□ 0.29
AP3B1O00203 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.89■□□□□ 0.29
AP3B1O00203 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms