Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 AC010331.1-201ENST00000611423 582 ntBASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM49D1C9J1S8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM49D1C9J1S8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 AC104819.1-201ENST00000504587 486 ntBASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM49D1C9J1S8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM49D1C9J1S8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM49D1C9J1S8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM49D1C9J1S8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms