Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 AL118508.1-201ENST00000613502 2345 ntBASIC15.88■□□□□ 0.13
LRIT2A6NDA9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 AC140658.5-201ENST00000438532 169 ntBASIC15.88■□□□□ 0.13
LRIT2A6NDA9 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 AC074386.1-202ENST00000463561 864 ntBASIC15.88■□□□□ 0.13
LRIT2A6NDA9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 AL671883.3-201ENST00000603274 991 ntBASIC15.88■□□□□ 0.13
LRIT2A6NDA9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 GGT3P-204ENST00000453783 1664 ntBASIC15.88■□□□□ 0.13
LRIT2A6NDA9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRIT2A6NDA9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 POLD2P1-201ENST00000511220 997 ntBASIC15.87■□□□□ 0.13
LRIT2A6NDA9 PGAM5P1-201ENST00000518923 814 ntBASIC15.87■□□□□ 0.13
LRIT2A6NDA9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 AC021097.1-201ENST00000607902 574 ntBASIC15.87■□□□□ 0.13
LRIT2A6NDA9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 GPAA1P2-202ENST00000606848 1787 ntBASIC15.87■□□□□ 0.13
LRIT2A6NDA9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRIT2A6NDA9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 AC011270.2-201ENST00000624293 2550 ntBASIC15.86■□□□□ 0.13
LRIT2A6NDA9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 ALOX12P2-203ENST00000570921 1945 ntBASIC15.86■□□□□ 0.13
LRIT2A6NDA9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.86■□□□□ 0.13
LRIT2A6NDA9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 AC109635.5-201ENST00000533593 962 ntBASIC15.86■□□□□ 0.13
LRIT2A6NDA9 AC040169.1-201ENST00000565382 521 ntBASIC15.86■□□□□ 0.13
LRIT2A6NDA9 AL009183.1-201ENST00000603760 355 ntBASIC15.86■□□□□ 0.13
LRIT2A6NDA9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT2A6NDA9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms