Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AL353732.1-201ENST00000569618 1459 ntBASIC15.02■□□□□ -0
PARPBPQ9NWS1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.02■□□□□ -0
PARPBPQ9NWS1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PARPBPQ9NWS1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.02■□□□□ -0
PARPBPQ9NWS1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PARPBPQ9NWS1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PARPBPQ9NWS1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.02■□□□□ -0
PARPBPQ9NWS1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.02■□□□□ -0
PARPBPQ9NWS1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PARPBPQ9NWS1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PARPBPQ9NWS1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PARPBPQ9NWS1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.02■□□□□ -0
PARPBPQ9NWS1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.02■□□□□ -0
PARPBPQ9NWS1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.02■□□□□ -0
PARPBPQ9NWS1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
PARPBPQ9NWS1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.02■□□□□ -0
PARPBPQ9NWS1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PARPBPQ9NWS1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.02■□□□□ -0
PARPBPQ9NWS1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.02■□□□□ -0
PARPBPQ9NWS1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.02■□□□□ -0
PARPBPQ9NWS1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.02■□□□□ -0
PARPBPQ9NWS1 AC096734.2-201ENST00000562054 433 ntBASIC15.02■□□□□ -0
PARPBPQ9NWS1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.02■□□□□ -0
PARPBPQ9NWS1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.02■□□□□ -0
PARPBPQ9NWS1 AC064836.3-201ENST00000607928 673 ntBASIC15.02■□□□□ -0
PARPBPQ9NWS1 REXO1L3P-201ENST00000622202 1288 ntBASIC15.02■□□□□ -0
PARPBPQ9NWS1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PARPBPQ9NWS1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PARPBPQ9NWS1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.02□□□□□ -0.01
PARPBPQ9NWS1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
PARPBPQ9NWS1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PARPBPQ9NWS1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PARPBPQ9NWS1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
PARPBPQ9NWS1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
PARPBPQ9NWS1 AC018695.7-201ENST00000624587 2492 ntBASIC15.02□□□□□ -0.01
PARPBPQ9NWS1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.02□□□□□ -0.01
PARPBPQ9NWS1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PARPBPQ9NWS1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PARPBPQ9NWS1 AL162727.3-201ENST00000635661 2787 ntBASIC15.02□□□□□ -0.01
PARPBPQ9NWS1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 MIR574-201ENST00000385209 96 ntBASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 OR7E47P-204ENST00000575924 449 ntBASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PARPBPQ9NWS1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PARPBPQ9NWS1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PARPBPQ9NWS1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15□□□□□ -0.01
PARPBPQ9NWS1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 AC080080.1-201ENST00000625121 2420 ntBASIC15□□□□□ -0.01
PARPBPQ9NWS1 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PARPBPQ9NWS1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PARPBPQ9NWS1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms