Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 AC092171.3-201ENST00000610122 2651 ntBASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 AP006288.1-201ENST00000446065 395 ntBASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 AC096734.2-201ENST00000562054 433 ntBASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CUEDC1Q9NWM3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.21■□□□□ 0.18
CUEDC1Q9NWM3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.21■□□□□ 0.18
CUEDC1Q9NWM3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 UBALD1-205ENST00000590891 2641 ntBASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 RHOQP3-201ENST00000437982 621 ntBASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 AC244107.1-201ENST00000442033 332 ntBASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 AL513480.1-201ENST00000451731 511 ntBASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 AP002490.2-201ENST00000524791 560 ntBASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.2■□□□□ 0.18
CUEDC1Q9NWM3 KRT18P28-201ENST00000453838 1332 ntBASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 AL671710.1-201ENST00000610245 2349 ntBASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms