Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 COX11-210ENST00000639671 696 ntBASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 CROCCP2-202ENST00000412962 2773 ntBASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 PCDHB17P-201ENST00000539533 2393 ntBASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 AC234783.1-201ENST00000441761 496 ntBASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 AP005482.1-201ENST00000563722 1273 ntBASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 AC008735.3-201ENST00000596646 500 ntBASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 AC074044.1-201ENST00000609673 707 ntBASIC20.78■□□□□ 0.92
CNTNAP4Q9C0A0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP4Q9C0A0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP4Q9C0A0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.77■□□□□ 0.92
CNTNAP4Q9C0A0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP4Q9C0A0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CNTNAP4Q9C0A0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.77■□□□□ 0.91
CNTNAP4Q9C0A0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.77■□□□□ 0.91
CNTNAP4Q9C0A0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
CNTNAP4Q9C0A0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CNTNAP4Q9C0A0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.77■□□□□ 0.91
CNTNAP4Q9C0A0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CNTNAP4Q9C0A0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CNTNAP4Q9C0A0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CNTNAP4Q9C0A0 AL139010.1-201ENST00000454878 894 ntBASIC20.77■□□□□ 0.91
CNTNAP4Q9C0A0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
CNTNAP4Q9C0A0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.77■□□□□ 0.91
CNTNAP4Q9C0A0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.77■□□□□ 0.91
CNTNAP4Q9C0A0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.91
CNTNAP4Q9C0A0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.77■□□□□ 0.91
CNTNAP4Q9C0A0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.77■□□□□ 0.91
CNTNAP4Q9C0A0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 KRT223P-202ENST00000449164 1292 ntBASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 AC025048.3-201ENST00000590609 569 ntBASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 AC005702.4-201ENST00000618393 416 ntBASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNTNAP4Q9C0A0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 AC134043.2-201ENST00000624206 2238 ntBASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNTNAP4Q9C0A0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms