Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CPNE1Q99829 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE1Q99829 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE1Q99829 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 AL365203.3-201ENST00000609742 2057 ntBASIC16.75■□□□□ 0.27
CPNE1Q99829 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE1Q99829 PTCHD3P3-201ENST00000403073 906 ntBASIC16.75■□□□□ 0.27
CPNE1Q99829 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
CPNE1Q99829 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.75■□□□□ 0.27
CPNE1Q99829 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.75■□□□□ 0.27
CPNE1Q99829 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 SART3-203ENST00000546611 1184 ntBASIC16.75■□□□□ 0.27
CPNE1Q99829 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE1Q99829 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE1Q99829 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.75■□□□□ 0.27
CPNE1Q99829 AL121772.3-201ENST00000610840 674 ntBASIC16.75■□□□□ 0.27
CPNE1Q99829 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 AC131009.4-201ENST00000624048 1740 ntBASIC16.75■□□□□ 0.27
CPNE1Q99829 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CPNE1Q99829 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CPNE1Q99829 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE1Q99829 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.75■□□□□ 0.27
CPNE1Q99829 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CPNE1Q99829 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CPNE1Q99829 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE1Q99829 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE1Q99829 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE1Q99829 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE1Q99829 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE1Q99829 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE1Q99829 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE1Q99829 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE1Q99829 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE1Q99829 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CPNE1Q99829 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE1Q99829 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE1Q99829 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
CPNE1Q99829 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE1Q99829 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE1Q99829 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE1Q99829 PI4KAP1-204ENST00000612579 1703 ntBASIC16.74■□□□□ 0.27
CPNE1Q99829 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE1Q99829 FER1L4-210ENST00000615531 5998 ntBASIC16.74■□□□□ 0.27
CPNE1Q99829 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE1Q99829 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE1Q99829 ARMC10P1-201ENST00000313754 855 ntBASIC16.74■□□□□ 0.27
CPNE1Q99829 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE1Q99829 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE1Q99829 FGFR3P6-201ENST00000457012 610 ntBASIC16.74■□□□□ 0.27
CPNE1Q99829 KRT18P31-201ENST00000506277 1292 ntBASIC16.74■□□□□ 0.27
CPNE1Q99829 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.74■□□□□ 0.27
CPNE1Q99829 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.74■□□□□ 0.27
CPNE1Q99829 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CPNE1Q99829 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE1Q99829 MIR3652-201ENST00000579335 131 ntBASIC16.74■□□□□ 0.27
CPNE1Q99829 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.74■□□□□ 0.27
CPNE1Q99829 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE1Q99829 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE1Q99829 AL445228.2-201ENST00000605589 952 ntBASIC16.74■□□□□ 0.27
CPNE1Q99829 AC008608.2-201ENST00000606089 416 ntBASIC16.74■□□□□ 0.27
CPNE1Q99829 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE1Q99829 AL596087.1-201ENST00000400979 1969 ntBASIC16.74■□□□□ 0.27
CPNE1Q99829 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
CPNE1Q99829 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
CPNE1Q99829 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE1Q99829 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE1Q99829 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE1Q99829 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CPNE1Q99829 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE1Q99829 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE1Q99829 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CPNE1Q99829 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CPNE1Q99829 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.73■□□□□ 0.27
CPNE1Q99829 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE1Q99829 SCARNA2-201ENST00000458748 420 ntBASIC16.73■□□□□ 0.27
CPNE1Q99829 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms