Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CHMP7Q8WUX9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 AL139010.1-201ENST00000454878 894 ntBASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 AC010328.2-201ENST00000597698 1111 ntBASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 AC090164.3-201ENST00000610780 2143 ntBASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHMP7Q8WUX9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 RPL13AP20-201ENST00000459725 609 ntBASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC26.68■■□□□ 1.86
CHMP7Q8WUX9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 AC016396.2-201ENST00000562575 1417 ntBASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 MGST3-203ENST00000367885 680 ntTSL 2 BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 RPL28-203ENST00000428193 573 ntTSL 2 BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 AC006033.1-201ENST00000440505 426 ntBASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 RPL28-207ENST00000558815 616 ntTSL 2 BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP7Q8WUX9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 AC006277.1-201ENST00000624348 1610 ntBASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 SLC25A24P2-201ENST00000415059 510 ntBASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 YBX1P6-201ENST00000442962 1002 ntBASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 AP001889.1-201ENST00000525414 633 ntBASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 RIT1-205ENST00000539040 919 ntTSL 2 BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 AC013467.2-201ENST00000605472 835 ntBASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 AC009542.2-202ENST00000619004 1067 ntBASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP7Q8WUX9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
CHMP7Q8WUX9 KRT8P39-201ENST00000396270 1433 ntBASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms